Detail information of GWHGAAEX009832/evm.TU.scaffold_26.35
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|307720288|ref|YP_003891428.1| | 3.00E-17 | ATPase P [Sulfurimonas autotrophica DSM 16294] |
| KOG | KOG0206 | 0 | P-type ATPase |
| nr | gi|695052365|ref|XP_009414236.1| | 0 | PREDICTED: phospholipid-transporting ATPase 1-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|P98204|ALA1_ARATH | 0 | Phospholipid-transporting ATPase 1 |
| trEMBL | tr|F6HIX9|F6HIX9_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB52145.1} |
| TAIR | 7303318 | 0 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000029 | 1308209 | 1314725 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009832
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF16209.4 | PhoLip_ATPase_N | 93 | 159 | 9.60E-23 |
| PF00122.19 | E1-E2_ATPase | 191 | 435 | 3.90E-07 |
| PF13246.5 | Cation_ATPase | 585 | 661 | 1.00E-09 |
| PF16212.4 | PhoLip_ATPase_C | 911 | 1149 | 7.70E-69 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0015914 | Biological Process | phospholipid transport |
| GO:0000166 | Molecular Function | nucleotide binding |
| GO:0000287 | Molecular Function | magnesium ion binding |
| GO:0140326 | Molecular Function | ATPase-coupled intramembrane lipid transporter activity |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0016021 | Cellular Component | integral component of membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 15.960 |
| SRR2545915 | Juvenile tuber | 22.600 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 13.890 |
| SRR5643514 | five period of Gastrodia elata | 11.220 | |
| SRR5643515 | five period of Gastrodia elata | 38.540 | |
| SRR5643524 | five period of Gastrodia elata | 14.080 | |
| SRR5643525 | five period of Gastrodia elata | 19.280 | |
| SRR5643528 | five period of Gastrodia elata | 67.870 | |
| SRR5643658 | five period of Gastrodia elata | 15.670 | |
| SRR5643659 | five period of Gastrodia elata | 65.280 | |
| SRR5643660 | five period of Gastrodia elata | 30.890 | |
| SRR5643661 | five period of Gastrodia elata | 48.400 | |
| SRR5643662 | five period of Gastrodia elata | 66.350 | |
| SRR5643663 | five period of Gastrodia elata | 44.370 | |
| SRR5643664 | five period of Gastrodia elata | 107.000 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 20.170 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 12.690 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 15.910 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 14.340 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 16.220 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 17.220 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 27.490 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 15.480 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 14.780 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 25.910 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 12.150 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 12.150 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 20.78 |
| Juven | Juvenile tuber | 11.34 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 96.29 | |
| Mother_Juven | Mother tuber of Juvenile | 136.51 |