Gene detail

Detail information of GWHGAAEX009842/evm.TU.scaffold_26.60

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|521462974\|ref\|YP_008149897.1\|	3.00E-20	hypothetical protein SCE1572_17400 [Sorangium cellulosum So0157-2]
KOG	KOG1208	3.00E-44	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
nr	gi\|695064778\|ref\|XP_009420957.1\|	1.55E-85	PREDICTED: (+)-neomenthol dehydrogenase-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|A4UHT7\|SALR_PAPBR	1.00E-45	Salutaridine reductase {ECO:0000312\|EMBL:ABO93462.1}
trEMBL	tr\|M0RHQ4\|M0RHQ4_MUSAM	1.00E-85	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr10P12780_001}
TAIR	AT3G61220	3.00E-44	NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000029	2418450	2428033	+

Transcript Sequence
>GWHTAAEX009842 ACTAATCTAATATTAAGTACTACAGTAACACTCGTTAATGGGTTAGATTACTTAATCTAATAACAGGGTGTTACAGTAACCCTGCCACTTCATGACGAATACATCCAGCTAGGAAGAAGACACTCATTGTTATTTCCTCAACAGCTCTTCTTAAAGAAGGCTTGACTTCTCGAGTTCCATGAAAATAGTTTTATTACGAGACGATCTCAACATTTATTCAGGCAATTAGTCATTGCTTTGCTATTAAAAGACTTGAAGCCCAATATCTTGTTGTTCCTTCTTAGCATTTTTTTATCCACCGAGATTGTTAAGGACATTATAGTTCATCCACTAATCTCAAGTAACACTTAGCAAATAAGTGAAATAAATATAAATAAAAGATGTATAAATGTATGATTCAACAATAAATAAGAACTTACAAATGACGACTTCTTGACATCAATCACTCTTTCAAATATTACATAACCAAATCTAAATATAATAATGATTTTGAATTAATTTTTTTAAGAAAATACTCGGTCGTTGGTTATTTGAAAATTTTAAAAATAAATAAAAATAATGAGTCAAGGGCATTCTAGTAAATTCCCAAGCTAAATACAAGCTAGGTATGGGCGTGCAGAGGAGCTGCCATTTTCTTACTGTTTGGATCGTCACTGTTCATTGCACTGCAGAGAGGTAAAGGGTAGTAAAAGAACAATGAGCAGCGATGCGAAGAGCGGGGCAGAGCAGACGGCTCCGGGTGGGCTCTGCGCCGTGGTGACAGGCGCGAACAAAGGCATCGGCCTCGCGATCGTCCGGCAGCTGGCTGAGCGGGGAGTCTCCGTCGTCCTAACGTCCCGCGACCAGAATCGGGGCTCCGCCTCCGTGCGCAGCCTCAACTCCGGCGGCCTCTCCGGCGTCCTTTTTCACCCCCTCGACGTCTGCGACTCCCTCAGCGCTGCTTCTCTCGCCGACTTCCTCTCCAAACGCTTCGGCAAGCTCGACATCCTCGTGAGTTTCTTCAACTCATGATCCATTCCGTCCCTATCGGCCTCTTCCTCTCTTTCTTTCCTTCCTTTTTTCAGGTCAACAACGCCGCGATTTCCGGAGCCGTCGTCGACACAGAGGGCCTCCTAGCCCTTGGAATCGATCCCGATTCTTGGGTGGGTTCCTTAACCTCTTTCTTTTTTTTTTCTTTTCTCTTTTTGGGGTATGTTTTACCCGCTTAGCACGCACAGCTTCAAATCTTAATCATAAAACGATTAACTTTTTAAAGAGGAAAGCTACTGACAGCGCATAAAACGCGTCGCTACCCGAAGAAGTTTTTTTTTTTTTGCGTGCGGGCAGGGGGGCGGGGGGATACGGGGGATTGGGACGCGCTCTATTCATCTGCTGCCGCAGTGCTGCTATCTAAAACAATTGTAGCCGATCGCGGTAACCCTGGTTTATAGCGATCGGTGGTGAATCGTCTGATTCAGACAATTCGCCCGGTGAATCAGACAATTGGCCGACAAGAAATAACGAGGAGTAAAGAAAGTAAAAAGCTTTCTAATAAGGAATTCCTCAAGGAAACGAGCAGTACAGAGCAGGTTAAACAATTTTGAACTTTGACCAGGGCTTGCAGGAGAAGTCCTTTCTAGATTGATTTGATAGATCATAAAGTCTTTTGAGGCCATAGTAGATCTTCTGTTTCGTAGAAAGGGTTGTTTTTTTAGTAATGCACGTTCAATTTGCTTTTTTACTCGACTTCTGCCCTTTTCGCTCATAATTATTGGAATCGTTACGAACTAAGCAATTCACGGAGCTAGGACAGTGAGTTCACCTAGCAACTTCTTCGACGACTGAGAACTCCTAATAAACGACCTCTTCTAGCACCTATTCTATATTTCCGGCGGCTTTCTTTCTTTGCATACAAGGAGCCTTTCAACTCGTAATCCTGAACTATCTCTTTCTTTCATACAGAGAAGAGTTTTTAAATCAAGCTCTTGGAGAAAAGGAAGATCATTAACCTGACCTGATGGTTTTCCTTTCCCTATGATTTCAGCGAGGAGAAGTCGCAAAAGTTTCCGAAATTGTCAGAATATTAAAAGAAATATAAAGTTGAAATAGGCTACCGGGGACTCCGCCTCGGGCTGCGTTTTCAGATCACGCTGGATTGCTTGGATCTGTTGTTCCCCATGTTTCTCAACAAGGGTTTGCTCTCGCCTCTGTTTTGTCTTGGAAAACTCCTTTCTCCTCCGCTAGGTCTGCGGAAAAATCGTTTAATCCTACTTTTGTTCCGTCTACTAATGTTATCACCATTGCGGATGAGGAGGTTGCTGAAGCTGTCTGGCAAGGCGAGCGATCAAGTGCGAGGAGTGATCCAGCACACACCCGAGAACGCGGCGGCATGCCTTGACACGAACTATTTCGGCTGCAAGAGAGTGACGGAAGCGCTTCTTCCCCTTCTCCGCCTCTCCCCCTCCGGCGCCAGAATCGTCAACGTGTCCTCTCTCAGATCAGAGCTCAGGAGGATTCGGAGCAAGGACATTCGGGAAGAACTATCGGATGAGGGGAGTCTAAGCGAGGGGAGGATCGAGAAGGTGTTGGAGAGATTTATGGAGGATTTGAAGGAGGGGAGGCTGGAGGAGGGTGGGTGGCCAATGATGCTGCCAGCTTACAGCATGTCAAAGGTGGCTCTGAACGCCTACACCAGGGTGATGGCCAGGCGGTGCCCTGAGATGAGGATCAACTGTGTTCATCCTGGCTTTGTGAAAACCGGCCTTAATTGGAACCAAGGCGTGGAAACCGTCGACGAAGGCGCAGTCGGCCCCGTCACGCTTGCTTTGCTGCCTCCCGGCGGCCCCTCAGGACACTACTTTGATAAGATCGCCATCGCTGACGCCTACGCATTCTGAGCCCATCTCATTTTCAACATTGCCCTTTCATGTCTGCCTGCCTGCCTTAAACCGAGCAAGGTTGTTAAACTTTTGGTATTCAATGTTTTGGATCTTATGTCATGTTGAATGTGTTGTTAGTGAGGTCATTATATTTTGTTTTGATTGCTGAGATTTATTTGATTGTGATGAACATGGTGAAAGTTCAAAGAGTTTTGGAATAATCATAAACAAGTTGTGGTTTACTCAGCCTATGACAATCTAATTGTGGAAAGATGAGTTTTAAAATTGCCTTGTAATGATAACGACTAAGAAGTGCGAATGCATATGCCCCCGCTTGACATTTGTTGAACTTAAATCATAATCATTCGGTTAGCCTTTTCAAAATAA

Network for GWHGAAEX009842

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00106.24	adh_short	157	199	6.50E-06

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K15095	E1.1.1.208	Biosynthesis of secondary metabolites	map01110
K15095	E1.1.1.208	Monoterpenoid biosynthesis	map00902

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	29.230
SRP064423	SRR2545915	Juvenile tuber	19.460
SRP108465	SRR5643513	five period of Gastrodia elata	31.840
	SRR5643514	five period of Gastrodia elata	32.880
	SRR5643515	five period of Gastrodia elata	34.960
	SRR5643524	five period of Gastrodia elata	31.480
	SRR5643525	five period of Gastrodia elata	42.700
	SRR5643528	five period of Gastrodia elata	32.180
	SRR5643658	five period of Gastrodia elata	41.630
	SRR5643659	five period of Gastrodia elata	35.540
	SRR5643660	five period of Gastrodia elata	41.020
	SRR5643661	five period of Gastrodia elata	42.250
	SRR5643662	five period of Gastrodia elata	38.770
	SRR5643663	five period of Gastrodia elata	42.060
	SRR5643664	five period of Gastrodia elata	65.670
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	32.340
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	29.930
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	30.180
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	28.640
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	25.960
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	23.030
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	25.970
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	25.170
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	28.910
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	28.390
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	34.330
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	34.330
SRP279888	Gastro	Gastrodia elata tuber	46.26
	Juven	Juvenile tuber	16.97
	Mother_Gastro	Mother tuber of Gastrodia elata	38.07
	Mother_Juven	Mother tuber of Juvenile	23.07