Detail information of GWHGAAEX009844/evm.TU.scaffold_26.62


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|170290521|ref|YP_001737337.1|2.00E-34small GTP-binding protein [Candidatus Korarchaeum cryptofilum OPF8]
KOGKOG00701.00E-128GTP-binding ADP-ribosylation factor Arf1
nrgi|351734536|ref|NP_001236384.1|1.10E-128uncharacterized protein LOC100306021 [Glycine max]
Swissprottr|P51823|ARF2_ORYSJ2.00E-130ADP-ribosylation factor 2
trEMBLtr|K4BW50|K4BW50_SOLLC4.00E-129Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc05g005190.2.1}
TAIRAT3G622901.00E-128ADP-ribosylation factor A1E

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002924301502464888-
Transcript Sequence

Network for GWHGAAEX009844

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00025.20Arf51771.70E-79
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K07937ARF1 Phospholipase D signaling pathway map04072
Endocytosismap04144

Gene Ontology

GO term OntologyName
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2142.100
SRR2545915Juvenile tuber1721.990
SRP108465SRR5643513five period of Gastrodia elata822.030
SRR5643514five period of Gastrodia elata803.030
SRR5643515five period of Gastrodia elata838.100
SRR5643524five period of Gastrodia elata821.170
SRR5643525five period of Gastrodia elata1596.300
SRR5643528five period of Gastrodia elata1509.420
SRR5643658five period of Gastrodia elata1486.010
SRR5643659five period of Gastrodia elata1697.420
SRR5643660five period of Gastrodia elata2023.460
SRR5643661five period of Gastrodia elata1868.940
SRR5643662five period of Gastrodia elata2495.580
SRR5643663five period of Gastrodia elata2265.280
SRR5643664five period of Gastrodia elata2808.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11203.140
SRR6049655Rhizomagastrodiae_C368-T10_good_11031.920
SRR6049656Rhizomagastrodiae_C368-T07_good_1977.930
SRR6049657Rhizomagastrodiae_C368-T07_good_11436.890
SRR6049658Rhizomagastrodiae_C368-T04_good_11715.710
SRR6049659Rhizomagastrodiae_C368-T04_good_12063.310
SRR6049660Rhizomagastrodiae_C368-T01_good_11261.270
SRR6049661Rhizomagastrodiae_C368-T04_good_11408.520
SRR6049662Rhizomagastrodiae_C368-T01_good_1873.720
SRR6049663Rhizomagastrodiae_C368-T01_good_11114.960
SRR6049664Rhizomagastrodiae_C368-T10_good_1960.660
SRR6049665Rhizomagastrodiae_C368-T10_good_1960.660
SRP279888GastroGastrodia elata tuber 2,704.26
JuvenJuvenile tuber1,183.83
Mother_GastroMother tuber of Gastrodia elata 945.41
Mother_JuvenMother tuber of Juvenile 1,122.71