Detail information of GWHGAAEX009853/evm.TU.scaffold_26.75
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|159896986|ref|YP_001543233.1| | 4.00E-54 | lipoate-protein ligase B [Herpetosiphon aurantiacus DSM 785] |
| KOG | KOG0325 | 3.00E-110 | Lipoyltransferase |
| nr | gi|743884232|ref|XP_010909626.1| | 2.10E-115 | PREDICTED: octanoyltransferase isoform X2 [Elaeis guineensis] |
| Swissprot | tr|Q9SXP7|LIPB_ARATH | 8.00E-111 | Octanoyltransferase |
| trEMBL | tr|A0A067JMK5|A0A067JMK5_JATCU | 1.00E-110 | Uncharacterized protein {ECO:0000313|EMBL:KDP25137.1} |
| TAIR | AT1G04640 | 3.00E-110 | lipoyltransferase 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000029 | 3090366 | 3091649 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009853
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF03099.18 | BPL_LplA_LipB | 57 | 170 | 8.20E-07 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K23735 | LIPT2, LIP2 | Metabolic pathways | map01100 |
| Lipoic acid metabolism | map00785 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0009249 | Biological Process | protein lipoylation |
| GO:0006464 | Biological Process | cellular protein modification process |
| GO:0033819 | Molecular Function | lipoyl(octanoyl) transferase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 9.420 |
| SRR2545915 | Juvenile tuber | 8.390 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 14.180 |
| SRR5643514 | five period of Gastrodia elata | 12.630 | |
| SRR5643515 | five period of Gastrodia elata | 12.360 | |
| SRR5643524 | five period of Gastrodia elata | 13.710 | |
| SRR5643525 | five period of Gastrodia elata | 15.040 | |
| SRR5643528 | five period of Gastrodia elata | 13.060 | |
| SRR5643658 | five period of Gastrodia elata | 14.350 | |
| SRR5643659 | five period of Gastrodia elata | 11.480 | |
| SRR5643660 | five period of Gastrodia elata | 9.340 | |
| SRR5643661 | five period of Gastrodia elata | 8.130 | |
| SRR5643662 | five period of Gastrodia elata | 10.640 | |
| SRR5643663 | five period of Gastrodia elata | 9.120 | |
| SRR5643664 | five period of Gastrodia elata | 7.470 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 13.270 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 12.150 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 18.250 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 13.720 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 19.920 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 16.840 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 15.990 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 17.460 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 19.090 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 20.890 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 19.000 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 19.000 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 14.88 |
| Juven | Juvenile tuber | 10.81 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 25.85 | |
| Mother_Juven | Mother tuber of Juvenile | 20.96 |