Detail information of GWHGAAEX009864/evm.TU.scaffold_26.87


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743865045|ref|XP_010904735.1|1.07E-22PREDICTED: uncharacterized protein LOC105032081 [Elaeis guineensis]
trEMBLtr|F6HQR4|F6HQR4_VITVI8.00E-18Putative uncharacterized protein {ECO:0000313|EMBL:CCB57145.1}
TAIRAT2G410105.00E-10calmodulin (CAM)-binding protein of 25 kDa

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002933876103388200+
Transcript Sequence

Network for GWHGAAEX009864

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05678.13VQ55762.60E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.360
SRR2545915Juvenile tuber4.410
SRP108465SRR5643513five period of Gastrodia elata15.200
SRR5643514five period of Gastrodia elata6.750
SRR5643515five period of Gastrodia elata15.370
SRR5643524five period of Gastrodia elata11.160
SRR5643525five period of Gastrodia elata26.270
SRR5643528five period of Gastrodia elata14.870
SRR5643658five period of Gastrodia elata40.660
SRR5643659five period of Gastrodia elata9.220
SRR5643660five period of Gastrodia elata20.630
SRR5643661five period of Gastrodia elata12.490
SRR5643662five period of Gastrodia elata6.850
SRR5643663five period of Gastrodia elata6.330
SRR5643664five period of Gastrodia elata6.440
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.670
SRR6049655Rhizomagastrodiae_C368-T10_good_15.140
SRR6049656Rhizomagastrodiae_C368-T07_good_16.560
SRR6049657Rhizomagastrodiae_C368-T07_good_18.610
SRR6049658Rhizomagastrodiae_C368-T04_good_18.300
SRR6049659Rhizomagastrodiae_C368-T04_good_15.190
SRR6049660Rhizomagastrodiae_C368-T01_good_14.810
SRR6049661Rhizomagastrodiae_C368-T04_good_15.720
SRR6049662Rhizomagastrodiae_C368-T01_good_12.580
SRR6049663Rhizomagastrodiae_C368-T01_good_12.820
SRR6049664Rhizomagastrodiae_C368-T10_good_14.530
SRR6049665Rhizomagastrodiae_C368-T10_good_14.530
SRP279888GastroGastrodia elata tuber 13.38
JuvenJuvenile tuber2.92
Mother_GastroMother tuber of Gastrodia elata 56.15
Mother_JuvenMother tuber of Juvenile 21.41