Gene detail

Detail information of GWHGAAEX009874/evm.TU.scaffold_26.112

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|262194545\|ref\|YP_003265754.1\|	3.00E-31	cytochrome P450 [Haliangium ochraceum DSM 14365]
KOG	KOG0156	9.00E-138	Cytochrome P450 CYP2 subfamily
nr	gi\|329568049\|gb\|AEB96145.1\|	0	flavonoid 3',5'-hydroxylase [Dendrobium moniliforme]
Swissprot	tr\|P37120\|C75A2_SOLME	2.00E-175	Flavonoid 3',5'-hydroxylase
trEMBL	tr\|F5A637\|F5A637_DENMN	0	Flavonoid 3',5'-hydroxylase {ECO:0000313\|EMBL:AEB96145.1}
TAIR	AT5G07990	9.00E-138	Cytochrome P450 superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000029	4219182	4223380	-

Transcript Sequence
>GWHTAAEX009874 ATGGAGTTTGAAGGAATCCGTTTTGGTTGGGCCTCTCCACCAGGTACGCCTCTGGTCCTCATCGGCTCCCTCCTTCTCTGCCTCTCCCTTCGCTTCCTCCTCCTTCGCCGCCGCCGGCTACCGCCGGGCCCTCTGAATCTGCCGATCGTCGGAGCGCTCCCCTTCATCGGGCCAAATCCGCACTCCGGCCTAGCCCGCCTCGCCCGCCGCCACGGCCCCATCATGTTCCTTAGGATGGGCGTACGCCGCGTCGTCGTCGCCTCCTCTTCCGCCGCCGCCCGCCTCTTCCTTAAAACCCTAGACGCGAGCTTCGCCGACCGCCCTCCCGGCGTGATGTCCAAGGAAATCACCCTCAACGGCCGGGATCTCGTTTTCGCGGACTACGGACCCGAGTGGAAGCTCCTCCGCAGATTCTCCGCCGTCCATCTCCTCGGATCCACGGCCATGGCGCGCTGGGCCGACCTCAGGCGCGACGAGGCCACCTCCATGCTCCGCTTCCTGAGGGATCGGAGCGATTCCGGAAACCCGGTGCTGCTTCCGGATGCGCTGATCCGCGCCATGGCGAATGTGATCGGGAGAATCGCGTTGAGCAAGAGGGTGTTCGAGGACGAGGGGGAGGAGTCCAAGGACTTCCAGGAAATGATCAAAGAGATTCTGGCCGGGCAGGCGACTTCCAACATTGCGGATCTGCTGCCCGCCCTCAAGTTCCTCGATCCCTCCGGGGCCAGGAAGAAGATGAGGGACCTGAATCGCAGGCTCATCGGAAAGATAAGCGAGTTAATGAGGGAGCACGCTAAGAGCGCAGGGGAGAGGCAGGGGAAGAACGTCGATCTCTTAGATCTTATTAGGGCTAACAAGCTTGTCGGAGACAGTGGGGAGGAGCTTCCTCAAGAATACACCAGGAACTTCATACTTGATTTGTTCGTGGCAGGGACGGACACCTCCGCCATCGTCATTGAGTGGGCGATGGCTGAGATGTTGAAAAACCCGATCATCTTCGAGCGGGCTCACGAAGAAATGGACAGAGTTATCGGCCGAGATCGGCTGCTGGAAGAATCCGACATACCGAATCTGCCTTACCTCCAGGCTATATGCAAGGAAGCTCTGAGAAAGCACCCTCCCACTCCGCTAAGCATACCTCATTACACCTCTGAGCCATGCGAGGCGGAAGGCTTCCACATTCCCGGCGGGACATGGCTGCTCATCAACGTATGGGCTATTGGGCGGGATCCGGATGTGTGGGAGAACCCGCTGGAGTTCGACCCGGAGAGATTTCTCCGAGGGAAGATGGCTAGTATAAATCCTATGGGAAATGACTTTGAACTTATACCATTTGGGGCAGGCAGGAGGATCTGCGCCGGGAAGCTGGCCGGGATGCTGATGGTGCAGTACTATCTTGGGATTTTAGTGCATGCTTTTGATTGGGGATTGCCGGAGGGAGAGGTGGACATGGAGGAAGGCCCTGGATTGGTGCTTCCCAAGGCAGTGCCGCTGTCGCTAGTGCCGAGGCCGCGGCTTGCGGAGGCTGCATACGGCCTTGTTTGATAGAGAAAACTAGCTATAAATTGTTGATCTTTGCATTTGAAAATAGTGCAACCTAATATTTGATGATCTATCATTATATCTAAATTATTATGTGATTAGCATCCACTTTACCTAGGCATCTCTTATGATTTAATAGGCAAACAAGCATATTTTTTACAAGAACAAAATATGGAATTCCTCCATATTTTGAGTGCACTAGATCTTGGAACACCCTCCAAGTTACTTTAGTTCTCATTTTAAATCATGAATGAGAGAGATTGAAAAAGCGTATAACTGGGTTGTGGCACTTGTATAAGATTTGGGAATGTTAGCTTAGGCTCATTGTCAAATGATTTATGGTATTTATAATATATAGGCTGATTAAGCAAATTTTCAAGCATCCCTTTACCAATTGCGGCTTGCCTAAATATTCTAATTATAATTTAGGCTGTTCGCATATATGCAGCGTGATACTTACGTAGATGACCGATATATATATTATTTTCATTATCCAGTTCAAGATAAGATCAAGTTTCTTCATTTCTGAAAAATTGTCATCATCAGCCTAAATATTCTAATTATAATTCTATCAATTGTCAAGATCAGCTTAGGCTCATTATATCTTATCAAACAACCACCTCCAACATTAAGCTCACCAATCCACTCATAACAAATCTGCCCGCCTAATTCTCCGCCGCAAAAAGAGAGGCAAAAAAGTAAACACAAGCGAGCTCTTCAAGGTCACCTAACCGTCCTCTCGTTTAACCTCAAGCAGCAGAATTTTATTTATTTTAACAAAAAAAAAAAAATGCCAATTTTGTTACAACAACGGATTGGAGAGCAATGCGCTGCGCGATGGCGCTATGAGGATTCAAGAGCACTGAGGATAGTCAACAAGTTTTTGGAGAAGGCAATCCTCTTAATTCAAAAGACAATAACAAAGGACGAGCTCAAGAAGGGAAGATTGTTCTTTGTATTTCTTATTTAGCATTTGCATGATAGAAAACCGTGGCTTGGAGACAACAACAAGGCTCTCTCTAATCTTTTATAAATCAAAAATCCATGAAACCCAACAAACGAGAAAGAAAAAGAAATACGCATGTAAGAGCATAAAAAATGATTGCCTCATTCAACGTTCCAGTCACCACAGAATTGGCAGAAAATAATATTAGTAGAGAGAAAGAAAGATGTAAGAGAAACACATAAACCCAACAATGCCAATAAGAAAATACAAGCACTTGGAAGCAGTAGGAACAACGGAAACAGAGAGATAGCAACAGAAGAAGCACCCTCCCACTCTTTTTCCCTTTTCATTTTAAGAAAAAACTAGTGGCAAGAGAGGAAAAGAGAGAGAGAGAGAGAGGTTAGAGCTCACTTGGCCATCATGACCTTGACGAACTCCTCGTAGTTGATCTGGCCATCGCCGTCGACATCGGCCTCTCGGATCATCTCGTCGACCTCGTCATCGGTGAGCTTCTCCCCGAGGTTGGTCATGACATGGCGGAGCTCAGCAGCAGAGATGAATCCGTTCTGATCCTTGTCAAACACGCGGAACGCCTCCTTCAGCTCCTCCTCAGAATCTGTGTCCTTCATCTTCCGCGCCATCAGGTTCAGGAACTCCGGGAAGTCGATAGTTCCATTGCCGTCCGCATCCACTTCATTGATCATGTCCTGCAGCTCCGCTTCCGTCGGGTTCTGCCCCAGTGAGCGCATCACTGTCCCCAACTCCTTGGTAGTGATGCAGCCTGTTCAACAGGCCAGCATCCATCCAGTCAGTCTTTATCACAAATAGAATTTCAGTATACGTTTTTGTGTGAAAGTTTGTAAACACACAAGCTTTAGTCCTACAAAGTGAGTCAGCTACGTGAATCTTTACTTCCATTATGCACAACCAAAAATAGATGATGCCTCTCTATATTCTATTTAAATAAAATCATTGAATAATTTACAGTCAGTCTTTACCATCTTCCTCTCTTTTAATATAGGCAAATTTTATAAACTCAAGTTTCCTAATTAGAGCATCATCAGTTAACACTTGATATGCCCTAACTATCTAAAAAATAATTTTCTCTAATTCCATTGGAACCGCTTCAACATTGTTACAAACGAAAATCTTAAAAATCTTCCTTTTTAACCATTGTTTTGTATGATTGAACTAAAGCATTACATTATCATCAATATTTATGCACTCAAACTTATGGCTTATAATATGTGATTATAAAGATGTCATAATGAGGGGTCATAATTCAAATACATGTTACAAGGTACATTAATTGCTCCGCAAAGCATTTTATTCAAGTAATCTTATCGGTGCTAATAAATGAAACTTCATTTACTTAAAAAAGCTTGCACTCCATATAATTCATTTAAAATCTATAGAGGAGGTATCTTTTAGATTCAAAAGCAGTCATTCAAAATTTGAGTTTTGCCAATAATGAAAAATGAGCAATAATAAAATTAAGAGTCGACTGCCTTTGGAGTTCCATTAGTGCACTTACAAAAAAGACAAAATCACGAGAGGGTTGATATTTGATTACAGAGGCTCACATGTGCGATGATGCTCACTAATCTTTTTTTTTTTTTTTTT

Network for GWHGAAEX009874

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.21	p450	41	494	4.20E-102

Protein Sequence

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP75B1

KEGG pathway

KO	Enzyme	pathway	mapID
K13083	CYP75A	Biosynthesis of secondary metabolites	map01110
		Flavonoid biosynthesis	map00941
		Flavone and flavonol biosynthesis	map00944

Gene Ontology

GO term	Ontology	Name
GO:0055114	Biological Process	oxidation-reduction process
GO:0005506	Molecular Function	iron ion binding
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	Molecular Function	heme binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	70.080
SRP064423	SRR2545915	Juvenile tuber	50.470
SRP108465	SRR5643513	five period of Gastrodia elata	212.470
	SRR5643514	five period of Gastrodia elata	118.290
	SRR5643515	five period of Gastrodia elata	225.950
	SRR5643524	five period of Gastrodia elata	171.250
	SRR5643525	five period of Gastrodia elata	499.820
	SRR5643528	five period of Gastrodia elata	466.110
	SRR5643658	five period of Gastrodia elata	650.540
	SRR5643659	five period of Gastrodia elata	80.230
	SRR5643660	five period of Gastrodia elata	80.380
	SRR5643661	five period of Gastrodia elata	95.720
	SRR5643662	five period of Gastrodia elata	113.310
	SRR5643663	five period of Gastrodia elata	99.910
	SRR5643664	five period of Gastrodia elata	87.400
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	82.110
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	69.590
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	77.430
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	104.340
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	107.110
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	144.930
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	86.030
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	104.580
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	70.300
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	53.680
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	116.270
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	116.270
SRP279888	Gastro	Gastrodia elata tuber	91.51
	Juven	Juvenile tuber	71.01
	Mother_Gastro	Mother tuber of Gastrodia elata	277.71
	Mother_Juven	Mother tuber of Juvenile	202.67