Gene detail

Detail information of GWHGAAEX009887/evm.TU.scaffold_26.131

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG0243	Kinesin-like protein
nr	gi\|743842268\|ref\|XP_010937758.1\|	PREDICTED: 125 kDa kinesin-related protein-like [Elaeis guineensis]
Swissprot	tr\|O23826\|K125_TOBAC	125 kDa kinesin-related protein
trEMBL	tr\|M0TXB6\|M0TXB6_MUSAM	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}
TAIR	AT3G45850	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000029	4904523	4914629	+

Transcript Sequence
>GWHTAAEX009887 GCTCTATTATTATCGGTCGAAGCCGGCAGTAAGCAGCAGCTTAACGCCGTTGCCGTCAACTCTTCCGAGTTCGCAGCCCCATCACCGCACCGGAAGCGTTTCCATAAATCATCTTCCTGCCAAATGTTCTCTCCACAATATAATTGACTGCTTCAAATTCAAAAAATGGCTCGCCTGGAAGAATCCAAATGGACAAATCTCTGCAAGCAAAGAAAGTCTGAATCCAGTTCAAATTTAAGCTCTTATAAGTTCCGCTTATCTTCTCTCAGCCTCGCCGCTGGCGACGGTCGCTTCTTCCATTGTTGTTCCTCCATCGGTCCTTCGAGCTATGGAAGCAGCATCGCAGAAGAAAGGGATCGGGGTGCTGATGCCGCCCTCTCCAATTCCTCGCCTGAGCGAAAAGTTCGGAAACAGCCTCAAGAATGAAAAGGAGAAGGGAGTCAATGTTCAAGTCATTGTCCGATGCAGGCCTTTGAGTGAGGAAGAGGAGGGTTTGCGGGTGCCGGCTGTCGTTTCCTGCAATGAGACGAGGAAAGAAGTGTCTGCTATTCAGAATATTGGGAACAAGCAGATCGATAAAACGTTTGTGTTTGATAAGGTTTTTGGGCCAGCATCACAACAAGCGGATTTGTTCAATCAATCCATCTCACCTATAGTGCATGAGGTTCTTGAAGGCTTTAACTGCACTATTTTTGCTTATGGGCAAACTGGTACTGGAAAAACTTACACTATGGAAGGAGGAGCAAAGAAAGCACAGAATGGGGAATTACCCAGTGATGCAGGTGTAATCCCAAGATCTGTTCGCCAGATATTTGACACACTTGAAACAGAGTCTGTGGATTACAGCATGAAAGTAAGCTTTTTGGAGCTCTATAATGAAGAAATAACAGATCTTTTGGCTCCTGAAGAGCCAAAGATGCTGGAAGATAAGTCTAAGAAGCCATTAGCTCTAATGGAGGATGGGAAAGGAGGAGTTTTTGTCAGAGGACTGGAGGAAGAGGTTGTTTGCACTGCAAGTGAAATATACAAGATACTAGACAGAGGCTCAGCAAAGAGACGCACAGCTGAGACACTTCTTAACAAGCAGAGCAGTCGTTCTCACTCCATATTCACTATCACAATTCACATAAAAGAGGTTACTCCAGAGGGTGAAGAAGTAATCAAAATTGGGAAGCTTAATCTTGTGGATTTAGCTGGTTCAGAGAGCATTTTGAGATCGGGTGCTCGTGAGGGAAGAGCAAGGGAAGCAGGAGAGATAAATAAAAGCTTGCTTACTCTTGGCCGTGTTATAAATGCACTTGTTGAGCATTTTGGCCATATTCCTTACAGAGAAAGCAAGCTGACAAGATTGCTGAGAGAATCCTTGGGGGGAAAAACAAAGACTTGTATCATTGCTACCATATCATCCTCTGTTCAGTGTTTAGAAGAGACACTGAGCACTTTAGATTATGCGCATCGCGCCAAGAACATAAAGAACAAGCCGGAGCTCAATCAAAAAATGATGAAATCTGCTGTGATGAAAGAGTTATGCTTTGAGATTGATCGTCTTAAACAAGAAGTAAATGCTGCAAGAGAGAAGTATGGCATATACATTCCCAAAGATCAGTTCCAGCAACAAGAAACTGAGAAGAAGGCTCTGGCCGAGAAAATGGAGAGCATGGAATCTGAATTAAAATCAAAGGATAAGCAATTAAGTGAGATTCAAGAGCTTTATGATTCACAACAGCATTTGTGTGTACAGTTGAGTGAAAAAGTTGACAATGATCAGAAAAAATTGAAAGACCATGAAAGCATGCTGGTTGACATGGAAGAAAAATGGCAAAAGGCAAAGTGTACAATAAAGGAAAAGGAATATCTGATAATGAATCTCCTCCGCTCAGAAAAAGCGCTAGTTGAACACTCCCAGGGCCTTCGATCTGAGCTGGAGCGTGCTGCTGCAGATATTTCTGGGTTGTGCTGTAAAATTGAGCACAAAGACAAGCTAGAAGAAAGGAACAGAATTACTGTCCAGAAGTTTCAATCGGAATTGGCTCAACGGCTGCAAAATTTACATAAAGTCATCTTAACTTCTGCAATGCTGCAAGAAAATCAACTGAAAAAAATGGAAGAAGACATGCAATCATTTGTTTCTGCAAAAACTGCTGCTGCCACAGATCTTATTGGATGGGTTGAAAAATTGAAAGGACTTTACGGCTCTGGAATTGCAGCACTGGATGGTTTGGCAGGAGAATTGGATCAAAATTCTAGAGTAACTTTCGGAAAGCTGTACTCGCAAATGTTGACAAATACTTCTTCCCTTGATGAATGCTTTAAAAGTATTGCTTTTGAGGCTGAGAATTTGTTGAAAGCCCTTGAGACCAGTCTTTCTAAACATGAAGTTAAGTTGAACGAATTTGCACAGGTGCAGAGGGAGGGACATTTAAGAACAGTGGAGGCAACACGGTTCATTTCAAGTACAACAACAACTTTTTTTCAAAGCTTAGACGTTCATGTAACAAAACTGTACAAAATCATGGAAGCAACACAGACTGTACAGAACCAGCAACTAAGTGAACTGGAGACGAAGCTTCAGGAATGTGCTGCTAAAGAAGAAGAACAATTAATAGAGAAGGTGGCCGAGATGTTGGCAAGTTCAAATGCTAGGAAGAAAAAAATGGTTCAAACAGCAGTTGACACTCTCAGAGCAAGTGCTTCTGATAGAACAAATAATATGCAAAACGAAATGTCAAATGCTCGACATGTTGCCTCATTCTTTAAAGAGAAATGGAGGCTTCACATGGAAGAGACTGAATGCCATCACCTTGAGAATGCTGATACAACGGAAGCTGGTAGAAGAAGCTTGGAAGAGAACCTGAAAGAATGCATGGCAGGCATAAAAGTAGGTTCACTGCTATGGGAAAATGCTCAGGATTCCTTGGTGAGCTTGGCAAGAGGAAATTTAACTTCAGTGGAGACATTAGCTAGGCACGGAATGGAAGCTAATCGACTACTAAGAGCTAACTCTTCTTCTGCTGCGACAACTGCATTAGCCAACCTTGGCATAGCAAACAGGAGTATTCAATCCTCAATTGACAATTCCTTAAAGCTTGATCAAGACACATGCGCAAGCATTGGTTCCTCCTTAATTCCATCTTACAAGGAGCTGTGCAACTTGAGAAATGCACACCATCAAACAATTGTAGAAATCACAGATAACGCTGGGAGATGCTTGGAACAAGAATATATGGCAGACGAGCCATCATTTTTGCCACCAAAAATGAGAGTGATCAATTTATCAAATGGAACATCAATTGAAGAGTTGAGGACACCGGCGCTTGAAGAACTTCTCAATGGATCCTGGGAGTCCAAAAATGCATGCAAGCAAGGAGATGGCGATATAAAGCTTATATATGCAGCATATGAGTACCATCCACAGGCCTTGAGGGATTCTAGAGTTCCCTTAACTACACAATATTAAGAGACAGCTCTACAACTTTGATGCATCCAAAAGCAGCATGTACATATTAGATATGGAGAACATTCAATAGTACTTTTGTTTCTTTTTGGAAGTTGGAAATAACTGTAGGGAGTAGAAGCTAAGGAAGAAAAGCACTTATAACGTGACCTAATTTGCATAATTGTTTCAAGTTATAGTTGCAAGCAAAAAAATTGTAGAATTTTCCAATCACAAGCTTTTAGTTATGTTATTAATTCTCATATTCTTAATGAAACAAGAGCTAATAGTTCTTAAAAACCTT

Network for GWHGAAEX009887

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00225.22	Kinesin	45	381	4.70E-116

Protein Sequence

>GWHPAAEX009887
MEAASQKKGIGVLMPPSPIPRLSEKFGNSLKNEKEKGVNVQVIVRCRPLSEEEEGLRVPAVVSCNETRKEVSAIQNIGNKQIDKTFVFDKVFGPASQQADLFNQSISPIVHEVLEGFNCTIFAYGQTGTGKTYTMEGGAKKAQNGELPSDAGVIPRSVRQIFDTLETESVDYSMKVSFLELYNEEITDLLAPEEPKMLEDKSKKPLALMEDGKGGVFVRGLEEEVVCTASEIYKILDRGSAKRRTAETLLNKQSSRSHSIFTITIHIKEVTPEGEEVIKIGKLNLVDLAGSESILRSGAREGRAREAGEINKSLLTLGRVINALVEHFGHIPYRESKLTRLLRESLGGKTKTCIIATISSSVQCLEETLSTLDYAHRAKNIKNKPELNQKMMKSAVMKELCFEIDRLKQEVNAAREKYGIYIPKDQFQQQETEKKALAEKMESMESELKSKDKQLSEIQELYDSQQHLCVQLSEKVDNDQKKLKDHESMLVDMEEKWQKAKCTIKEKEYLIMNLLRSEKALVEHSQGLRSELERAAADISGLCCKIEHKDKLEERNRITVQKFQSELAQRLQNLHKVILTSAMLQENQLKKMEEDMQSFVSAKTAAATDLIGWVEKLKGLYGSGIAALDGLAGELDQNSRVTFGKLYSQMLTNTSSLDECFKSIAFEAENLLKALETSLSKHEVKLNEFAQVQREGHLRTVEATRFISSTTTTFFQSLDVHVTKLYKIMEATQTVQNQQLSELETKLQECAAKEEEQLIEKVAEMLASSNARKKKMVQTAVDTLRASASDRTNNMQNEMSNARHVASFFKEKWRLHMEETECHHLENADTTEAGRRSLEENLKECMAGIKVGSLLWENAQDSLVSLARGNLTSVETLARHGMEANRLLRANSSSAATTALANLGIANRSIQSSIDNSLKLDQDTCASIGSSLIPSYKELCNLRNAHHQTIVEITDNAGRCLEQEYMADEPSFLPPKMRVINLSNGTSIEELRTPALEELLNGSWESKNACKQGDGDIKLIYAAYEYHPQALRDSRVPLTTQY

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007018	Biological Process	microtubule-based movement
GO:0005524	Molecular Function	ATP binding
GO:0003777	Molecular Function	microtubule motor activity
GO:0008017	Molecular Function	microtubule binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	12.660
SRP064423	SRR2545915	Juvenile tuber	8.130
SRP108465	SRR5643513	five period of Gastrodia elata	19.480
	SRR5643514	five period of Gastrodia elata	20.940
	SRR5643515	five period of Gastrodia elata	15.810
	SRR5643524	five period of Gastrodia elata	19.370
	SRR5643525	five period of Gastrodia elata	6.000
	SRR5643528	five period of Gastrodia elata	5.640
	SRR5643658	five period of Gastrodia elata	5.060
	SRR5643659	five period of Gastrodia elata	15.460
	SRR5643660	five period of Gastrodia elata	20.580
	SRR5643661	five period of Gastrodia elata	16.630
	SRR5643662	five period of Gastrodia elata	13.890
	SRR5643663	five period of Gastrodia elata	20.170
	SRR5643664	five period of Gastrodia elata	18.560
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	20.620
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	27.950
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	24.670
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	14.060
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	17.600
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	17.800
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	13.510
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	13.110
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	21.100
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	23.720
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	34.910
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	34.910
SRP279888	Gastro	Gastrodia elata tuber	24.82
	Juven	Juvenile tuber	11.49
	Mother_Gastro	Mother tuber of Gastrodia elata	16.97
	Mother_Juven	Mother tuber of Juvenile	13.67