Detail information of GWHGAAEX009890/evm.TU.scaffold_26.134
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|451948279|ref|YP_007468874.1| | 1.00E-30 | serine/threonine protein kinase [Desulfocapsa sulfexigens DSM 10523] |
| KOG | KOG0032 | 0 | Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily |
| nr | gi|695064802|ref|XP_009420969.1| | 0 | PREDICTED: calcium/calmodulin-dependent serine/threonine-protein kinase 1-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|O80673|CAMK1_ARATH | 0 | CDPK-related kinase 1 |
| trEMBL | tr|M0RHP0|M0RHP0_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P12640_001} |
| TAIR | AT2G41140 | 0 | CDPK-related kinase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000029 | 5038884 | 5046174 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009890
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 129 | 391 | 2.30E-67 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CAMK_CDPK |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005509 | Molecular Function | calcium ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 22.590 |
| SRR2545915 | Juvenile tuber | 29.370 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 21.440 |
| SRR5643514 | five period of Gastrodia elata | 25.220 | |
| SRR5643515 | five period of Gastrodia elata | 27.840 | |
| SRR5643524 | five period of Gastrodia elata | 25.740 | |
| SRR5643525 | five period of Gastrodia elata | 16.440 | |
| SRR5643528 | five period of Gastrodia elata | 16.500 | |
| SRR5643658 | five period of Gastrodia elata | 16.850 | |
| SRR5643659 | five period of Gastrodia elata | 20.570 | |
| SRR5643660 | five period of Gastrodia elata | 21.150 | |
| SRR5643661 | five period of Gastrodia elata | 20.050 | |
| SRR5643662 | five period of Gastrodia elata | 18.500 | |
| SRR5643663 | five period of Gastrodia elata | 23.070 | |
| SRR5643664 | five period of Gastrodia elata | 18.110 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 22.620 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 16.060 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 22.560 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 19.700 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 24.540 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 22.400 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 21.500 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 19.470 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 25.360 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 25.940 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 22.870 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 22.870 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 22.14 |
| Juven | Juvenile tuber | 20.34 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 18.93 | |
| Mother_Juven | Mother tuber of Juvenile | 12.66 |