Detail information of GWHGAAEX009906/evm.TU.scaffold_26.161


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743842424|ref|XP_010937801.1|1.37E-148PREDICTED: protein IQ-DOMAIN 1-like [Elaeis guineensis]
Swissprottr|Q9SF32|IQD1_ARATH8.00E-81Protein IQ-DOMAIN 1
trEMBLtr|M0SFJ8|M0SFJ8_MUSAM3.00E-140Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P17820_001}
TAIRAT5G030402.00E-101IQ-domain 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002962868976300135-
Transcript Sequence

Network for GWHGAAEX009906

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00612.26IQ1141323.60E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms89.860
SRR2545915Juvenile tuber296.240
SRP108465SRR5643513five period of Gastrodia elata104.920
SRR5643514five period of Gastrodia elata86.820
SRR5643515five period of Gastrodia elata101.700
SRR5643524five period of Gastrodia elata87.230
SRR5643525five period of Gastrodia elata120.300
SRR5643528five period of Gastrodia elata99.910
SRR5643658five period of Gastrodia elata136.640
SRR5643659five period of Gastrodia elata177.110
SRR5643660five period of Gastrodia elata195.320
SRR5643661five period of Gastrodia elata199.320
SRR5643662five period of Gastrodia elata190.600
SRR5643663five period of Gastrodia elata197.960
SRR5643664five period of Gastrodia elata218.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1129.460
SRR6049655Rhizomagastrodiae_C368-T10_good_168.460
SRR6049656Rhizomagastrodiae_C368-T07_good_1123.800
SRR6049657Rhizomagastrodiae_C368-T07_good_1124.330
SRR6049658Rhizomagastrodiae_C368-T04_good_1102.200
SRR6049659Rhizomagastrodiae_C368-T04_good_197.620
SRR6049660Rhizomagastrodiae_C368-T01_good_1111.330
SRR6049661Rhizomagastrodiae_C368-T04_good_1104.820
SRR6049662Rhizomagastrodiae_C368-T01_good_1111.470
SRR6049663Rhizomagastrodiae_C368-T01_good_1104.980
SRR6049664Rhizomagastrodiae_C368-T10_good_1110.960
SRR6049665Rhizomagastrodiae_C368-T10_good_1110.960
SRP279888GastroGastrodia elata tuber 197.73
JuvenJuvenile tuber166.33
Mother_GastroMother tuber of Gastrodia elata 89.15
Mother_JuvenMother tuber of Juvenile 95.24