Detail information of GWHGAAEX009910/evm.TU.scaffold_26.166_evm.TU.scaffold_26.167


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|357134888|ref|XP_003569047.1|1.60E-105PREDICTED: tetraspanin-6 isoform X1 [Brachypodium distachyon]
Swissprottr|Q84WF6|TET5_ARATH1.00E-84Tetraspanin-5
trEMBLtr|I1HML7|I1HML7_BRADI6.00E-106Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI2G38130.1}
TAIRAT3G120903.00E-83tetraspanin6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002966379176639459-
Transcript Sequence

Network for GWHGAAEX009910

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00335.19Tetraspannin92438.60E-21
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.280
SRR2545915Juvenile tuber3.670
SRP108465SRR5643513five period of Gastrodia elata32.080
SRR5643514five period of Gastrodia elata61.780
SRR5643515five period of Gastrodia elata37.830
SRR5643524five period of Gastrodia elata59.070
SRR5643525five period of Gastrodia elata226.090
SRR5643528five period of Gastrodia elata111.570
SRR5643658five period of Gastrodia elata155.210
SRR5643659five period of Gastrodia elata70.200
SRR5643660five period of Gastrodia elata90.990
SRR5643661five period of Gastrodia elata57.410
SRR5643662five period of Gastrodia elata51.560
SRR5643663five period of Gastrodia elata75.000
SRR5643664five period of Gastrodia elata101.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_157.940
SRR6049655Rhizomagastrodiae_C368-T10_good_157.180
SRR6049656Rhizomagastrodiae_C368-T07_good_155.700
SRR6049657Rhizomagastrodiae_C368-T07_good_159.240
SRR6049658Rhizomagastrodiae_C368-T04_good_135.970
SRR6049659Rhizomagastrodiae_C368-T04_good_135.810
SRR6049660Rhizomagastrodiae_C368-T01_good_142.720
SRR6049661Rhizomagastrodiae_C368-T04_good_129.630
SRR6049662Rhizomagastrodiae_C368-T01_good_122.450
SRR6049663Rhizomagastrodiae_C368-T01_good_133.140
SRR6049664Rhizomagastrodiae_C368-T10_good_142.250
SRR6049665Rhizomagastrodiae_C368-T10_good_142.250
SRP279888GastroGastrodia elata tuber 87.18
JuvenJuvenile tuber117.68
Mother_GastroMother tuber of Gastrodia elata 75.85
Mother_JuvenMother tuber of Juvenile 104.82