Detail information of GWHGAAEX009911/evm.TU.scaffold_26.168


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|34498467|ref|NP_902682.1|1.00E-29serine carboxypeptidase [Chromobacterium violaceum ATCC 12472]
KOGKOG12820Serine carboxypeptidases (lysosomal cathepsin A)
nrgi|743842528|ref|XP_010937832.1|0PREDICTED: serine carboxypeptidase-like 27 [Elaeis guineensis]
Swissprottr|Q9SFB5|SCP27_ARATH0Serine carboxypeptidase-like 27 (Precursor)
trEMBLtr|B9HLN0|B9HLN0_POPTR0Carboxypeptidase {ECO:0000256|RuleBase:RU361156}
TAIRAT3G079900serine carboxypeptidase-like 27

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002966399246659706-
Transcript Sequence

Network for GWHGAAEX009911

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00450.21Peptidase_S10464582.00E-142
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0004185Molecular Functionserine-type carboxypeptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.520
SRR2545915Juvenile tuber6.660
SRP108465SRR5643513five period of Gastrodia elata42.810
SRR5643514five period of Gastrodia elata98.720
SRR5643515five period of Gastrodia elata63.450
SRR5643524five period of Gastrodia elata107.330
SRR5643525five period of Gastrodia elata71.260
SRR5643528five period of Gastrodia elata144.260
SRR5643658five period of Gastrodia elata112.360
SRR5643659five period of Gastrodia elata9.710
SRR5643660five period of Gastrodia elata6.510
SRR5643661five period of Gastrodia elata9.510
SRR5643662five period of Gastrodia elata5.640
SRR5643663five period of Gastrodia elata7.210
SRR5643664five period of Gastrodia elata3.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_131.850
SRR6049655Rhizomagastrodiae_C368-T10_good_169.580
SRR6049656Rhizomagastrodiae_C368-T07_good_163.170
SRR6049657Rhizomagastrodiae_C368-T07_good_118.160
SRR6049658Rhizomagastrodiae_C368-T04_good_127.250
SRR6049659Rhizomagastrodiae_C368-T04_good_123.740
SRR6049660Rhizomagastrodiae_C368-T01_good_130.800
SRR6049661Rhizomagastrodiae_C368-T04_good_117.690
SRR6049662Rhizomagastrodiae_C368-T01_good_1118.180
SRR6049663Rhizomagastrodiae_C368-T01_good_1109.700
SRR6049664Rhizomagastrodiae_C368-T10_good_161.760
SRR6049665Rhizomagastrodiae_C368-T10_good_161.760
SRP279888GastroGastrodia elata tuber 4.24
JuvenJuvenile tuber5.94
Mother_GastroMother tuber of Gastrodia elata 53.10
Mother_JuvenMother tuber of Juvenile 64.77