Gene detail

Detail information of GWHGAAEX009912/evm.TU.scaffold_26.170

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG4670	Uncharacterized conserved membrane protein
nr	gi\|672110088\|ref\|XP_008793513.1\|	PREDICTED: transmembrane protein 209 isoform X1 [Phoenix dactylifera]
trEMBL	tr\|M0TSA9\|M0TSA9_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P21060_001}
TAIR	AT1G07970	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000029	6730838	6775337	-

Transcript Sequence
>GWHTAAEX009912 TTCAAATCAGATGTGTGTTGCCCTAGACAACGCATTGGAGCTTGGAAGTTCAGGACTACGCAATCTTGCCCGCCCAAAAGATTTGAAGAAAGCATCCGTGGAGCAAGTAGTGTCGCGGTGCTTGGAAGCTCCGACATCTCTCTCTCCTCTTGGACGCCATGGAAGGCGGGGAAAGTTCTCCTGTGGTTTCCAAGCCCAAGTTTTCGGTTTACCAGAATCCCACTTTCTCCGAGGCACTTACATCCGCCAGTCTCCGTCCTTCCCGCGCCACTCTCGTTCTCATCTCAGCATCTTTTGTCGCCACAATTGTAGCCCTCTTTACACTGTCATCCTGGGAAGAAGAAGCCGTGAAGAGATTAATGGGATTCGACTGTTCCGCTTGCATTGCATTTCTGATTTCTAAGGTTATGCATGCTGCAATTGGCTTAGTCTTCTTGGCAACCTTGTCTGCCATCATCAGGGCTTTTTCTGTTCTCCACGTCAGGAAGAATTTGGTTGCACCCTCTTCCACGAAAACTTCAGAAAATGTGAAAATTCTTACTGATCATCAGTTAAGACTGCTGGGTTTGAAGCCAAAACCGACTGATAACAGCAACAACCCAGGGTCTGCTAAGAAACTTCCAGCGTCTAAACCTGTCTCCTCTCCGCCGATTTCAGAACCCCTTGTCCCAGTTCGAAAATCAACTTTCAGCTACACTCCTCCTCACTCATTGAGAAGCAGGTCCGACCATCAGAGATCCAGCCCAGGAAAGAAGGCGGTCAAATCACCCAACTCTCCCTCTTCAATTCCCTATACGTATGCTTCCACCTCTCCAGCAACCCCGTGGTCTAGGCCTAGCCCTGGCAGTGCTAATGGAATATTAACGGAAGAAAAGTTTGAGGAATTTCTGGCTAGTGTAGATGATAGCATCATGGGCTCAGAGGCTAAATCTTTAGCTACACATCCACCTGCATTCAGTGGGTTCGGGGTTGTTAGTCCTGGGTCTATTGTGAGCTCAACTAATGCGTCTGCTGTTGCAAGAAACACGCCACTGAGGGCAGTTCGCATGTCCCCTGGTTCGCTTCAAAAGTACTCACCCCCAAAGAAGGGCGAGGGCGAACTCCCTCCTCCGTTGTCACTAGAACAGACTGTTGAGGCTTTTGAGAACATTGGCGTTCACCCTCAAATTGAACAATGGCGAGATCGCCTCAGGCAATGGCTTTCTTCAGTTTTATTAAATCCCCTTCTTGATAAAATTGAGACAAGTAATATAATGGTTATGCAAGCAGCAGCCAGCCATGGTGCGAACATTACCATAAACCAAGTTGGCTGTGATTCCCCTAATACAGCATTACCTGTTCATGCATCACTAGTTTATGGGGTGAAGGAGTGGCAGCCCACAGTAACTTTAGATGAAGATGGATTCCTCCTTCAAATGCATGCTTCTCTTGTTCAAGCACGTGATGGATCAATGTCAAGGTCACCAGTTTCTAGTCAGCAGCAATCGCAGCAGATGGCATTACTTCCTCTTATTCAGAAGAGTTTAGATGCTATCACTGAGCACCAGAGGCTTAAAACACTCATGAAAGGAGAGCTTATTAAGGGTTTGCTCGTTCAAAGCTCTGTACCTGCAGAGTTTACTGTTCACAGAGTACGAGAGCTCGCTGAAGGTACATGCTTGAAGAATTTTGACTATATTGGAAATGGGGCTAGTTTTGACAAATCAGAGAAAAGATGGACAGCTGATGTCCCAAGTGATTCACATTTGCTGCTTTATCTATTCTGTGCTTTCTTAGAGCATCCCAACTGGATGCTACATGTCAACCCAACATCCTACTCTGGCTCCCAATCAAGCAAGAACCCTTTGTTCTTGGGAATCCTTCCCCCAAAAGATTGGTTTCCTGAGAAGTATGTGGCAGTTATATCTGGAGTTCCATGTATCATACACCCAGGAGCATGTGTGCTGTCCATTGGGAAACAAGCACCTCCATTATTTTCCTTATACTGGGATAAGAAACTGCAGTTCTCTATTCAAGGAAGAACTGCATTATGGGACTCTATTTTGCTTCTCTGTCATAGGATTAAGGTTGATTATGGTGGGATTGTTCATGGAGTTCATCTCGGTTCTTCTGCTTTCAACATTCTCCCAATTTTTGACTTGACCCCAGATTGCTGAGTTTAACGTGGAGGAAATGAATGCAGCCAAAGTTCAAAGACAAGGAGAGAAAGCCAATGGACACGACGGAGATGAACGATTTCTCGTTTGTGCGGAGCTTCATGATCGAACGATTTCTCGTTCGAAGACAAAGTAGACAAAACCGAAGGAGATGAACTTTTCTCATTTGTGCGGAGTTTCACACATGAATTATAGAAGCCGAAGGAGAGCAGAGAAAATGCAGAAAAAGGCAGGAAAGGAATTGTTCTGTCGTAAGTGAGGATTACATGGTGAGATAACACATACATATATAGGCACAAGTAGTTTAGCAATGGTAGTTCAGCAACTACATGGCTAATATACTTATATATGTTATTATTCCCCCGCAAACGAGCAACCATTCATAGATGTTGTGAGTTAGGATTGATGTTTTAGGAATTATGTCGTTGGTAATGATTTTGTGAAGATGTCTGCGAGCTGGTCTTTTGTAGATGTGTAAAGTTCAATTTCTTGTTTAGATATACTGTCTTGAGTAAAGTGGCAATCAACCTTAATGTGCTTTGTTCTTGCGTGGAAGATGTGATTCTTTGCTAGAGCTATGGCAGAGAGATTATCACGTTATAGCTTGGTTGGTCTG

Network for GWHGAAEX009912

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF09786.8	CytochromB561_N	14	660	4.30E-166

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	10.630
SRP064423	SRR2545915	Juvenile tuber	15.490
SRP108465	SRR5643513	five period of Gastrodia elata	14.310
	SRR5643514	five period of Gastrodia elata	14.920
	SRR5643515	five period of Gastrodia elata	12.340
	SRR5643524	five period of Gastrodia elata	14.620
	SRR5643525	five period of Gastrodia elata	8.940
	SRR5643528	five period of Gastrodia elata	6.560
	SRR5643658	five period of Gastrodia elata	8.390
	SRR5643659	five period of Gastrodia elata	14.830
	SRR5643660	five period of Gastrodia elata	14.230
	SRR5643661	five period of Gastrodia elata	14.140
	SRR5643662	five period of Gastrodia elata	11.290
	SRR5643663	five period of Gastrodia elata	13.130
	SRR5643664	five period of Gastrodia elata	12.960
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	14.420
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	31.900
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	17.320
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	15.270
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	13.150
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	14.130
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	15.200
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	14.720
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	17.260
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	15.680
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	16.240
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	16.240
SRP279888	Gastro	Gastrodia elata tuber	15.70
	Juven	Juvenile tuber	23.96
	Mother_Gastro	Mother tuber of Gastrodia elata	12.60
	Mother_Juven	Mother tuber of Juvenile	18.52