Detail information of GWHGAAEX009915/evm.TU.scaffold_26.173
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502744|ref|YP_001958461.1| | 1.00E-19 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| KOG | KOG1187 | 0 | Serine/threonine protein kinase |
| nr | gi|743781342|ref|XP_010920862.1| | 0 | PREDICTED: putative serine/threonine-protein kinase-like protein CCR3 [Elaeis guineensis] |
| Swissprot | tr|Q9LY50|ACCR3_ARATH | 0 | Putative serine/threonine-protein kinase-like protein CCR3 (Precursor) |
| trEMBL | tr|F6GUR0|F6GUR0_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB43473.1} |
| TAIR | AT3G55950 | 0 | CRINKLY4 related 3 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000029 | 6878758 | 6881422 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009915
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 457 | 661 | 3.90E-39 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_CR4L |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 4.490 |
| SRR2545915 | Juvenile tuber | 4.070 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 23.760 |
| SRR5643514 | five period of Gastrodia elata | 11.450 | |
| SRR5643515 | five period of Gastrodia elata | 40.710 | |
| SRR5643524 | five period of Gastrodia elata | 15.190 | |
| SRR5643525 | five period of Gastrodia elata | 33.860 | |
| SRR5643528 | five period of Gastrodia elata | 99.040 | |
| SRR5643658 | five period of Gastrodia elata | 29.090 | |
| SRR5643659 | five period of Gastrodia elata | 15.440 | |
| SRR5643660 | five period of Gastrodia elata | 10.670 | |
| SRR5643661 | five period of Gastrodia elata | 20.880 | |
| SRR5643662 | five period of Gastrodia elata | 32.090 | |
| SRR5643663 | five period of Gastrodia elata | 16.090 | |
| SRR5643664 | five period of Gastrodia elata | 37.580 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 16.250 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 12.940 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 12.600 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 16.630 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 12.670 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 18.770 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 23.700 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 15.100 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 10.320 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 16.200 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 12.320 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 12.320 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 8.08 |
| Juven | Juvenile tuber | 11.45 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 111.58 | |
| Mother_Juven | Mother tuber of Juvenile | 80.86 |