Gene detail

Detail information of GWHGAAEX009938/evm.TU.scaffold_261.7

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|743845228\|ref\|XP_010938529.1\|	PREDICTED: uncharacterized protein LOC105057580 [Elaeis guineensis]
trEMBL	tr\|M0RZJ3\|M0RZJ3_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P13350_001}
TAIR	AT2G41770	Protein of unknown function (DUF288)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000253	171794	193226	+

Transcript Sequence
>GWHTAAEX009938 AGAAGAAGAAGAAGAAGAAGAGCACTGAGCGATCCAGAGAGGCAATTGGAATTGAGCAATGCTTGTTCAGGACCGCTCCACCCCTGATCAACAGCTCTCCACTAATGTTCGCTGCAGCACTGCCTCGGTATTCCCTGCAGTCGGAGGTTTAATCAAATTCCTTGACGATCTCACTGTCTGGGCCTCCGAAAACCTCTATAAAGCCGTCATCTTCGGCCTCCTCCTCGCCTCCACCGCCGCCGTCCTCTTCCTCCTTCCAGCCATCGGCGACAGCGCTGCTTTTCTCTGCTTCGAAAGATCCGAATCCTCCCACTTTGATTCGTCCCGTATTCGCCTCCCTTCCGTCAACTGGAACTCAGTTCCTCGAATCTCCTCTTCCCCATCAGATCCATTCTCCTCGTTTCGTGCAGACCGGTGGATCGTCGTAGCTGCTCCATCTCACTCCCTCCCATCCGCTACGCTCCGCCGCTTGGCCCATATCAAGGGATGGCAGCTTCTTGCCGTCGCCACCTCCCGCACTCCTTCCGATTTCTCACTCAGAGGTGCCATCGTTCTTTCTCTTGATCTCCAAACCAGCCTCGGCTTCCGCTCTGCCGACTATCTCCCGTACGATTCCCACGTCCGCAAGTCCATCGGCTACCTTTTCGCCTTCCAGCACGGCGCGAGACTGATTTACGACACTGACGACCGAGCCGATGTTCTTGACGGTGATTTGGGGCGGCGATTCGACTTAGAACTCTCTGCTGGCGGTGAAATCATCCTTCAGTACAGCCACCATGACCCCAACCGCACCGTCGTTAACCCTTACATTCACTTTGGCCAGCGGTCAATCTGGCCGAGGGGTCTCCCTCTCGATCTTGTGAACAAAATTGACAGTGAAGAGTTCTACACTGAGGTCTATGGCGGGCATCAGTTTATACAGCAAGGCCTCTCTGATGGGCTCCCTGATGTGGACGCGGTGTTCTATTACACCCGGAAGTCCTCCGGACTCGAAACTTTTGATCTCCGATTCGATTCCGATGCTCCCAAAGTGGCCCTTCCTCAGGGAACCCTGGTGCCAGTTAACTCTTTCAACACTCTCTTCCATTCCCAGGCCTTTTGGGCTCTGATGCTCCCTGTTTCTGTGAGTTCCATGGCATCTGACATTCTAAGGGGATACTGGGCGCAGAGGATTCTTTGGGAAATCGGTGGATATGTTGCGGTTTACCCGCCTACAATCCATCGACTGGACAATGTAGAAGCCTATCCTTTTGCAGAGGAGAAGGATCTTCATATCAATGTGGGCAGGCTGATTGAGTTCTTGGTTTCATGGAGGTCAAACAAGCCCACGCTGTTTGAGAGAATTTTACATCTTAGCTATGCTATGGCTGAGGAGGGATTCTGGTCGGAACTGGACATGAGGTTCACTGCAGCTTGGCTACAGGATTTGCTGGCTGTTGGGTACCAACAGCCAAGGCTGATGTCCTTGGAGTTGGGCCGGCCAAGGGCCATGATTGGGCATGGAGACATGAAGGAATTTCACCCTAAGAAGCTTCCATCTGTGCACCTTGGAGTGGAAGAGGTTGGGATTGTGAGTGGTGAGATTGGAAATCTCATCAAGTGGAGAAAGAATTTTGGGAATGTCGTACTTATTATGCACTGTAGTGGACCAGTTGATCGCACGGCTCTTGAGTGGAGGCTGCTGTATGGCAGAGTGTTTAAAACTGTAATTATATTGTCGGAGGATAGAAATGCAGATCTCATGGTAGAACATGGTCAGTTATCGCATGCGTATAGGTACCTCTCCAAGATATTCAGCAGGTATGCTGGTGCAGATGGCTTTGTGTTCCTTCAGGATAAAATGATTCTCAACTATTGGAATCTCCTCCACGCTGATAAGAACAAAGTGTGGATCACCGACAAGGTTCCTGAATCATGGTTCACCATCAACATTGATTCAAACAGCTCCCAGTGGCTTATAAACCAAGCAGCTCTGGTGAAGCAGTCTGTGAAGAACTTCCCCATTCATTTCTTAACAAACTTTAAGGACGGCGTTGGCGGAGAAGAGAGGCTCGTTATCTGCGGGAGCGAGCTATTTTACGTCCCCCGCCGTCTCACCGGCGACTTCGTCGACCTCCTTTCGCTCATCGGCGACCTCGACATCCACCACACGGTTGCCGTTCCCATGGTCCTCATGGCCATGGACTCTCCTCGTAATTTCGACTCCGCCGCTCTGTCAGCCACTCTGTATCTAAGCAAGGAGAGAGGGGCGGCCGGTTTCGACCTTACCGGCTATTCAGTGCGAGCTCCGGCGGTGTATCCCTTGAGTGTGAGCAATGAGTCTGAGTTCATAAAGCTCGTCCGAGTAATGGCATCCGGGGATGAGTTATTGAAGGAATTGTTATGATTTTCATGTGTTATCCACCCAACGGTCTTGAAGATTTAATAAACAATAAGCTCGGAAAATGCAGAGGACATCAAAGAGACGGCAGACTCAGCAGAAGCAAAGCCTTTGGAAGAAACTATTGCTTAAATTTAATTATAATGAATTTCATATCATTTATTACTAATTATAAGATGTATGCAATAACATTTTAATTAATTTATCATGATTATTTTATTATTATTATTATTAAGAAGATATGAACATCCACTTTTGGTATTTTATATGATATTATTTGCTTAAGCTGAACGAGCAGGTCTCAACCAATAAAAAAAGTAAGCGCAAATAATGTAATCATATTATTTAAGTTTATTTGATAGCATTAGAGAAAATTTAATATTTTTTTATTTGAA

Network for GWHGAAEX009938

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03385.16	STELLO	361	469	4.40E-10

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GTnc
Carbohydrate-Active enzymes Family	GTnc

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	31.410
SRP064423	SRR2545915	Juvenile tuber	38.220
SRP108465	SRR5643513	five period of Gastrodia elata	45.530
	SRR5643514	five period of Gastrodia elata	39.680
	SRR5643515	five period of Gastrodia elata	37.630
	SRR5643524	five period of Gastrodia elata	39.490
	SRR5643525	five period of Gastrodia elata	56.080
	SRR5643528	five period of Gastrodia elata	61.700
	SRR5643658	five period of Gastrodia elata	94.290
	SRR5643659	five period of Gastrodia elata	54.630
	SRR5643660	five period of Gastrodia elata	60.950
	SRR5643661	five period of Gastrodia elata	52.260
	SRR5643662	five period of Gastrodia elata	54.390
	SRR5643663	five period of Gastrodia elata	68.960
	SRR5643664	five period of Gastrodia elata	62.220
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	45.500
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	56.630
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	47.800
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	54.250
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	46.610
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	51.160
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	45.780
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	50.760
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	37.050
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	38.960
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	33.450
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	33.450
SRP279888	Gastro	Gastrodia elata tuber	60.09
	Juven	Juvenile tuber	85.15
	Mother_Gastro	Mother tuber of Gastrodia elata	28.03
	Mother_Juven	Mother tuber of Juvenile	48.44