Detail information of GWHGAAEX009941/evm.TU.scaffold_261.10


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG28305.00E-159Protein phosphatase 2A-associated protein
nrgi|743755571|ref|XP_010912190.1|0PREDICTED: PP2A regulatory subunit TAP46-like [Elaeis guineensis]
Swissprottr|Q8LDQ4|TAP46_ARATH5.00E-171PP2A regulatory subunit TAP46
trEMBLtr|E0CV55|E0CV55_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI23016.3}
TAIRAT5G530005.00E-1592A phosphatase associated protein of 46 kD

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000253209232241351+
Transcript Sequence

Network for GWHGAAEX009941

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04177.11TAP42113861.60E-82
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K17606IGBP1, TAP42 Autophagy - animal map04140
Autophagy - yeastmap04138
Autophagy - othermap04136

Gene Ontology

GO term OntologyName
GO:0009966Biological Processregulation of signal transduction

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms49.740
SRR2545915Juvenile tuber44.700
SRP108465SRR5643513five period of Gastrodia elata37.560
SRR5643514five period of Gastrodia elata38.780
SRR5643515five period of Gastrodia elata35.890
SRR5643524five period of Gastrodia elata36.270
SRR5643525five period of Gastrodia elata38.970
SRR5643528five period of Gastrodia elata39.650
SRR5643658five period of Gastrodia elata40.400
SRR5643659five period of Gastrodia elata53.480
SRR5643660five period of Gastrodia elata60.820
SRR5643661five period of Gastrodia elata58.610
SRR5643662five period of Gastrodia elata53.190
SRR5643663five period of Gastrodia elata62.260
SRR5643664five period of Gastrodia elata60.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_138.740
SRR6049655Rhizomagastrodiae_C368-T10_good_136.040
SRR6049656Rhizomagastrodiae_C368-T07_good_134.710
SRR6049657Rhizomagastrodiae_C368-T07_good_134.260
SRR6049658Rhizomagastrodiae_C368-T04_good_133.100
SRR6049659Rhizomagastrodiae_C368-T04_good_136.100
SRR6049660Rhizomagastrodiae_C368-T01_good_134.890
SRR6049661Rhizomagastrodiae_C368-T04_good_130.320
SRR6049662Rhizomagastrodiae_C368-T01_good_137.930
SRR6049663Rhizomagastrodiae_C368-T01_good_135.380
SRR6049664Rhizomagastrodiae_C368-T10_good_144.420
SRR6049665Rhizomagastrodiae_C368-T10_good_144.420
SRP279888GastroGastrodia elata tuber 61.08
JuvenJuvenile tuber78.96
Mother_GastroMother tuber of Gastrodia elata 34.80
Mother_JuvenMother tuber of Juvenile 54.55