Detail information of GWHGAAEX009942/evm.TU.scaffold_261.11


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG08347.00E-64CDK9 kinase-activating protein cyclin T
nrgi|672126930|ref|XP_008786923.1|5.17E-118PREDICTED: cyclin-T1-3-like isoform X4 [Phoenix dactylifera]
Swissprottr|Q9FKE6|CCT15_ARATH1.00E-66Cyclin-T1-5
trEMBLtr|A0A061ETJ8|A0A061ETJ8_THECC2.00E-106Cyclin family protein isoform 2 {ECO:0000313|EMBL:EOY05624.1}
TAIRAT5G451907.00E-64Cyclin family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000253243467256382-
Transcript Sequence

Network for GWHGAAEX009942

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00134.22Cyclin_N912296.10E-22
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.560
SRR2545915Juvenile tuber20.490
SRP108465SRR5643513five period of Gastrodia elata18.720
SRR5643514five period of Gastrodia elata21.660
SRR5643515five period of Gastrodia elata23.210
SRR5643524five period of Gastrodia elata21.460
SRR5643525five period of Gastrodia elata24.480
SRR5643528five period of Gastrodia elata26.620
SRR5643658five period of Gastrodia elata28.520
SRR5643659five period of Gastrodia elata21.130
SRR5643660five period of Gastrodia elata21.320
SRR5643661five period of Gastrodia elata19.100
SRR5643662five period of Gastrodia elata25.350
SRR5643663five period of Gastrodia elata19.490
SRR5643664five period of Gastrodia elata21.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.030
SRR6049655Rhizomagastrodiae_C368-T10_good_128.580
SRR6049656Rhizomagastrodiae_C368-T07_good_120.240
SRR6049657Rhizomagastrodiae_C368-T07_good_123.680
SRR6049658Rhizomagastrodiae_C368-T04_good_123.550
SRR6049659Rhizomagastrodiae_C368-T04_good_128.730
SRR6049660Rhizomagastrodiae_C368-T01_good_125.490
SRR6049661Rhizomagastrodiae_C368-T04_good_123.620
SRR6049662Rhizomagastrodiae_C368-T01_good_120.950
SRR6049663Rhizomagastrodiae_C368-T01_good_123.620
SRR6049664Rhizomagastrodiae_C368-T10_good_126.640
SRR6049665Rhizomagastrodiae_C368-T10_good_126.640
SRP279888GastroGastrodia elata tuber 20.93
JuvenJuvenile tuber25.77
Mother_GastroMother tuber of Gastrodia elata 39.34
Mother_JuvenMother tuber of Juvenile 35.53