Gene detail

Detail information of GWHGAAEX009943/evm.TU.scaffold_261.12

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|427736601\|ref\|YP_007056145.1\|	1.00E-43	outer membrane protein/protective antigen OMA87 [Rivularia sp. PCC 7116]
nr	gi\|672163492\|ref\|XP_008801596.1\|	0	PREDICTED: protein TOC75-3, chloroplastic-like [Phoenix dactylifera]
Swissprot	tr\|Q9STE8\|TC753_ARATH	0	Protein TOC75-3, chloroplastic (Precursor)
trEMBL	tr\|W1PDG4\|W1PDG4_AMBTC	0	Uncharacterized protein {ECO:0000313\|EMBL:ERN07972.1}
TAIR	AT3G46740_2	0	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000253	257441	274119	+

Transcript Sequence
>GWHTAAEX009943 ATCATCAAATCTCTTACCTAATCCTCCATCAAAGCCCGCAATGGCCTTTGCACAGCCCACAATGGCCTTTGCACAGGACAGGCAGCTGCTGAGCTCCGCGATATTCCCTACGGCCCCTTCCCGCCACCGGCGACCTGTCTCCAGCGTCGTTTCTTCATCACATTTCTCGGAGGGGAGAGGATCTCCTTACCAAATCACTCCAACTAAGGAACCCACAAAGTGGAACCACAAGAAAGTCTTGTTGCTCTCCGCTGCAACTTTCACCGTCTCTGCGGCCGGAGGTGGTTTTCTTCATAATTTTTCTTCAAATCCGCCTCCTGGAAACACCGGAGGCGGAGGAGGAAGTGGGTGGGGTGGCTGGGCCGGCGGCGGCAATGGTGGTGGCGGAGGATTCTGGTCAAGATTCCTTTCCGCTCCATCTATCTTTGCGCACGCAGAGGAGGGGAAACAGGAAACGGGTGCAGGAACGGAATGGGATACCCATGGCTTGCCGACCAATATCATGATTCAACTGAGCAAGCTCAGCGGGTTGAAGAGATACAAGATAGCTGAGATCCTTTTCTTCGATCGGAGAAGGGGTTCAACTGTTTCAAACTCTGTGGATTCATTGTTTGAGATGGTATCTATCCGATCTGGCGGTGTCTACACCAAGGCTCAGCTCCAGGCTGAGCTTGAAACTCTGGCTACCTGCGGCATGTTTGAGAAGGTTGACCTAGAGGGAAAGACTAAGCCTGATGGGTCTCTGTCTCTGGTTGTCTCATTTACGGAGAGTACCTGGCAGTCTGCAGATTCTTTCAGGTGCATCAACGTTGGTCTCTTGCCGCAGACAAAACAACTGGAGATGGATCCGGACATGACCGACAGGGAGAAGCTTGCTTATTACAAGGGCATGGAAAAGGACTATCGGAAGAGAATTGAGAGATCCAGGCCATGTTTGCTACCAAATGCGGTGAGGAAGGATGTGTTAAAGATGTTGGGTAATCAAGGAAAGGTGAGCGCTAGGTTGCTGCAGAGAATTAGGGACACGGTGCAGAAATGGTATCATGACGAAGGATATGCTTGCGCTCAAGTGGTGAATTTTGGTAACTTGAACACCAGGGAGGTTGTTTGTGAAGTAGTGGAGGGGGACATAACGCAGCTTTCTATCCAATTCCAGGACAAACTTGGAAATGTCTGTGAAGGGAACACTCAGTTATCTGTGATCCACAGAGAGCTGCCCAAGCAGCTGCGGCCAGGGCATGTCTTTAATATTGAAGCTGGTAAGCAAGCTTTGAGGAACATAAATTCTCTTGCTCTTTTCTCTAACATTGAGGTGAATCCAAGACCCGATGAAAAGAATGATGGAGGAATTATAGTTGAAATCAAGGTCAAGGAGTTGGAACAAAAATCTGCTGAAGTTAGTACTGAGTGGAATATTGTACCTGGACGTAATGGACGCCCGACACTGGCATCTGTTCAACCTGGTGGAACAGTCACCTTTGAACATAGGAACATTAAAGGGCTTAATAGGTCTATGGTAGGTTCAGTGACATCAAGCAATCTTCTAAATCCTCAGGATGATCTCTCCTTCAAGCTTGAATATGCGCATCCATACGTAGACGGTGTGATGAATCCGCGCAACCGTACATTCCGCGCTAGTTGCTTCAACAGCAGAAAGATGAGTCCGGTCTTCACCGGTGGGCCCGGCGTGGATGAAGTCCCGCCAATCTGGATCGACAGAGTCGGCTTCAAGGCAAATATTAGTGAGAGCTTCACGCGGCAAAGCAAGTTCACTTATGGGCTGGTGATGGAAGAGATCACAACGCGGGATGAAACCAGCAGTGTGTGCACTCATGGCGCTCGGCCGCTGCCGAGCGGCGGTCTGAGCTTGGACGGCCCTCCGACCACCCTCAGCGGCACCGGCGTCGACCGAGTCGCCTTCGCCCAGGCCAACATCACCCGCGACAACACCAAATTCGTCAACGGCGCCGTCGTCGGTGACAGGAACGTCTTCCAGTTGGATCAAGGGCTGGGGATCGGCAGCGGCTTTCCGTTCTTCAACCGGCACCAGCTGACGGTCACCCGCTTCATTCAGCTGAGACAGGTGGAGGAAGGCGCCGGAAAGCCCCCGCCACCGGTGCTCGTCCTCCACGGCCATTACGGGGGATGCGTTGGCGATCTGCCGAGCTATGACGCCTTCACCCTCGGCGGGCCGTACTCCGTCAGAGGTTACAGCATGGGCGAGCTCGGTGCCTGCAGGAACATCCTCGAGGTAGCTGCGGAAATAAGGATACCGGTGAGGAAGACGCAGGTGTACACGTTCGTGGAGCATGGGAACGACCTGGGGAGCTCGAAGGATGTGAAGGGGAACCCGACGGAATTTTTCCGGCGGGTGGGGTGCGGATCGTCATACGGAGTCGGGGCCAAGCTGGGCCTGGTCAGGATGGAGTATGCCGTCGACCACAACTCCGGCACCGGCGCCGTCTTTTTCAGGTTCGGTGAGAGGTTTTGATCAGCCGTTCTTCTCACTCTTTTTTGTTTTTGTTTGCCTTTTATTTTTATTTTATTATATATATTTGAACTTTTTCAGTAGAACTTAGTTTTTCTTTCAAATTTTATTATATTTTGGATGCTCGAGTTTTGATCGTTTCAGATAATATGCTTTTGATTAACTGGTTTGAATTAAATCGCTTTGGTTGGGTTTAGGGTATGAGATGGCTTTTTTTCTGTTCAAATAAAATGTTAGGATAATTATCCGTAATCTGAGTTTTTTTAGTCCAATGATCTAACAGGAAGTCATATGTTCAATTCTCATCTCCTACAAAGTGAAATTTCTGAGTATATATTTTTACATATTTAGAATTTAGAATTTTAATATTTATTAAATTTATATTTTTTTCAATTTGAATTATTTGAGGATAGTTTTGTAATATTTTAGATTTAGGTGGTAAATTTGTCAATAGAAATTCCAAAAATATTTATATCAATTTATATTAAAAATGCTGATTTTGTGCATAATTGATTAAAAATGTGTATATACTTGGTACAAAATCAAATAAAAAAACAAAAGGCAACAATAGTTTAAACAAAAACTTCTTATTGCAAAAGAGTTCAGATGCACTGGCCTCAAATATTTTCCTAAAAAATTATAAAAGTTACACGATTTAGTGGCTCTGATTTTTTTGATCGAGTTTCCACTGTATATAATTCATGGAAAACCAATTGGATTTCAAAGCTCTTATATTCTTTATCTCCATTTAAAAGTTCACAAACATAATTTTAAATAATCTTCTAATTCTTAAAAAAATATCAAATAATTTTATATGAAAAATACTATTTAAGTCGGTTCATCTGTTAATTTTATTAGTGTTTAATCATCATGTATTATTCATGGTCAAATTATATTTTAAATAAAATTTAGTCATCTAACATATTTTGAAATTATTTGCTTTAAAAACAAAATCTTATTTTAAATATATATTTTTTAGCAAGTCCACAAGCAAAAATAATTTTTATTGAAACAAAAGTTATGTAATATACTAAAATAAAACTCCTATATAAAAGGGTTTTATACATAATTTTTAAATAGATCTAAAATAATATTAAATTCATTTTTATGTGTATGGAATACTTATAACCATGCCTACCGAGCGTCTCATCTCTTATCTCTTGAAGACACTTTCACCTTCGCCTCTTTCATCGTCTCACTGCTATTATGAGTCACTTTTCCCCACCTAACGGTAAAGCCTTCTTTCGCTTAAGGAGCCGAATCAACCGTGTCTTTCGTCTTCCTAGTTCGTGAGTATTCACATTCAAATAAGAACCCCGCTTTCATTTACTGCTTGCCTTAGGCTTTAGGCTGACTGGCAAAAAACAGGGGGCAGCGAAGCTAAATCAGGTTAGGCTTAGGGTTCCTATATAGATCCCTCTTAAAGTAGTAAACCATCCAGAAGCTTTTCAGAAAACATTTTTGGAACATAAAAAAAATCTGCTTCGCCATAAAACTAGACTGAAAATAAACAACATAAACACAACTATAAAGGATTAGAAGTTAGAAACTCAAAAAACATATCGACGGAATAACTAATGAAAATTAATGTTACTATTTGGGCAGGGGCCGCGCGAGCGCGTTCCCCCTCAAGCACAAATTATGACGTCCACTCTCCTACATGTAGGAGATGGTAAGCATGCGCCCCTTCAAAGTGCAATGAAGATCGCAGGCTTAGGCGAGGGACCTTCTTGAACATCCCTAACACCCCGCCCAGGTAAGTATGGAACAACGTCGCCCCCTATAAGCCTTTTATAACATCACGCGGAGCTAAATATTGATGGTTAAGCGATGTGGGACTAACCGGTACAAATAATTCGATTTTATCACATAAATACAACAATTACATTAATTATTCTTATATTTTAAATTTTTATAACATCATAATTTGGGAACAGTTGTTAAAATCTAGACACGTTGCCCAAAATATTTGAAAATGCAAATAATTTTTTTTTTATGATACAATCTCTTCCAAAAAATATATTATATTTTCTTATAATTTCACATATTTTTGGTACTTGATGGGATAGTCTAGTAAC

Network for GWHGAAEX009943

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01103.22	Bac_surface_Ag	487	815	2.00E-12

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0019867	Cellular Component	outer membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	62.000
SRP064423	SRR2545915	Juvenile tuber	23.230
SRP108465	SRR5643513	five period of Gastrodia elata	23.870
	SRR5643514	five period of Gastrodia elata	19.560
	SRR5643515	five period of Gastrodia elata	21.380
	SRR5643524	five period of Gastrodia elata	21.190
	SRR5643525	five period of Gastrodia elata	16.250
	SRR5643528	five period of Gastrodia elata	17.270
	SRR5643658	five period of Gastrodia elata	24.460
	SRR5643659	five period of Gastrodia elata	33.980
	SRR5643660	five period of Gastrodia elata	35.000
	SRR5643661	five period of Gastrodia elata	36.300
	SRR5643662	five period of Gastrodia elata	47.100
	SRR5643663	five period of Gastrodia elata	42.390
	SRR5643664	five period of Gastrodia elata	42.940
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	28.760
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	17.550
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	26.560
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	27.170
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	26.860
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	24.050
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	27.860
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	26.340
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	29.510
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	27.290
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	22.310
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	22.310
SRP279888	Gastro	Gastrodia elata tuber	43.20
	Juven	Juvenile tuber	35.34
	Mother_Gastro	Mother tuber of Gastrodia elata	10.94
	Mother_Juven	Mother tuber of Juvenile	28.36