Detail information of GWHGAAEX009954/evm.TU.scaffold_261.24


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|427737427|ref|YP_007056971.1|8.00E-41methionine-R-sulfoxide reductase [Rivularia sp. PCC 7116]
KOGKOG08565.00E-66Predicted pilin-like transcription factor
nrgi|449432763|ref|XP_004134168.1|1.60E-70PREDICTED: peptide methionine sulfoxide reductase B5-like isoform 1 [Cucumis sativus]
Swissprottr|Q10L32|MSRB5_ORYSJ8.00E-67Peptide methionine sulfoxide reductase B5
trEMBLtr|A0A0A0L5Q0|A0A0A0L5Q0_CUCSA6.00E-71Uncharacterized protein {ECO:0000313|EMBL:KGN57043.1}
TAIRAT4G048305.00E-66methionine sulfoxide reductase B5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000253456266461770-
Transcript Sequence

Network for GWHGAAEX009954

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01641.17SelR101284.40E-47
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0033743Molecular Functionpeptide-methionine (R)-S-oxide reductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.980
SRR2545915Juvenile tuber13.540
SRP108465SRR5643513five period of Gastrodia elata63.530
SRR5643514five period of Gastrodia elata76.100
SRR5643515five period of Gastrodia elata62.700
SRR5643524five period of Gastrodia elata69.330
SRR5643525five period of Gastrodia elata62.010
SRR5643528five period of Gastrodia elata44.720
SRR5643658five period of Gastrodia elata51.440
SRR5643659five period of Gastrodia elata32.170
SRR5643660five period of Gastrodia elata25.280
SRR5643661five period of Gastrodia elata36.450
SRR5643662five period of Gastrodia elata34.660
SRR5643663five period of Gastrodia elata35.330
SRR5643664five period of Gastrodia elata34.560
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_141.600
SRR6049655Rhizomagastrodiae_C368-T10_good_1108.350
SRR6049656Rhizomagastrodiae_C368-T07_good_148.440
SRR6049657Rhizomagastrodiae_C368-T07_good_141.090
SRR6049658Rhizomagastrodiae_C368-T04_good_133.090
SRR6049659Rhizomagastrodiae_C368-T04_good_132.520
SRR6049660Rhizomagastrodiae_C368-T01_good_139.640
SRR6049661Rhizomagastrodiae_C368-T04_good_127.960
SRR6049662Rhizomagastrodiae_C368-T01_good_155.180
SRR6049663Rhizomagastrodiae_C368-T01_good_144.990
SRR6049664Rhizomagastrodiae_C368-T10_good_189.970
SRR6049665Rhizomagastrodiae_C368-T10_good_189.970
SRP279888GastroGastrodia elata tuber 32.54
JuvenJuvenile tuber34.86
Mother_GastroMother tuber of Gastrodia elata 45.12
Mother_JuvenMother tuber of Juvenile 28.55