Detail information of GWHGAAEX009956/evm.TU.scaffold_261.26
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|146299570|ref|YP_001194161.1| | 1.00E-74 | UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase [Flavobacterium johnsoniae UW101] |
| nr | gi|743772321|ref|XP_010916467.1| | 7.01E-172 | PREDICTED: uncharacterized protein LOC105041272 [Elaeis guineensis] |
| trEMBL | tr|D7SJ39|D7SJ39_VITVI | 1.00E-143 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI15500.3} |
| TAIR | AT1G73740 | 2.00E-98 | UDP-Glycosyltransferase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000253 | 472298 | 476868 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009956
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00574.22 | CLP_protease | 39 | 107 | 0.00035 |
| PF03033.19 | Glyco_transf_28 | 60 | 200 | 2.60E-32 |
| PF04101.15 | Glyco_tran_28_C | 255 | 415 | 8.70E-31 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K02563 | murG | Metabolic pathways | map01100 |
| Peptidoglycan biosynthesis | map00550 | ||
| Cell cycle - Caulobacter | map04112 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0030259 | Biological Process | lipid glycosylation |
| GO:0005975 | Biological Process | carbohydrate metabolic process |
| GO:0016758 | Molecular Function | transferase activity, transferring hexosyl groups |
| GO:0050511 | Molecular Function | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.200 |
| SRR2545915 | Juvenile tuber | 7.200 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 1.330 |
| SRR5643514 | five period of Gastrodia elata | 2.020 | |
| SRR5643515 | five period of Gastrodia elata | 3.040 | |
| SRR5643524 | five period of Gastrodia elata | 2.750 | |
| SRR5643525 | five period of Gastrodia elata | 0.100 | |
| SRR5643528 | five period of Gastrodia elata | 0.000 | |
| SRR5643658 | five period of Gastrodia elata | 0.000 | |
| SRR5643659 | five period of Gastrodia elata | 0.040 | |
| SRR5643660 | five period of Gastrodia elata | 0.000 | |
| SRR5643661 | five period of Gastrodia elata | 0.090 | |
| SRR5643662 | five period of Gastrodia elata | 0.000 | |
| SRR5643663 | five period of Gastrodia elata | 0.030 | |
| SRR5643664 | five period of Gastrodia elata | 0.000 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 1.970 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 3.880 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 3.980 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 2.950 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 1.710 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.860 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 3.420 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 5.980 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1.920 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 1.280 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 2.770 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 2.770 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.02 |
| Juven | Juvenile tuber | 0.11 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.18 | |
| Mother_Juven | Mother tuber of Juvenile | 0.69 |