Gene detail

Detail information of GWHGAAEX009967/evm.TU.scaffold_261.37

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|218961072\|ref\|YP_001740847.1\|	1.00E-10	Chaperone protein DnaJ (Heat shock protein 40) (HSP40) [Candidatus Cloacimonas acidaminovorans str. Evry]
nr	gi\|672189067\|ref\|XP_008813744.1\|	0	PREDICTED: uncharacterized protein LOC103724304 [Phoenix dactylifera]
Swissprot	tr\|Q9FH28\|DNJ49_ARATH	7.00E-11	Chaperone protein dnaJ 49
trEMBL	tr\|W5GE33\|W5GE33_WHEAT	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Traes_6AS_6BD95451E.2}
trEMBL	tr\|W5GE33\|W5GE33_WHEAT	6.00E-35	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Traes_6AS_6BD95451E.2}
TAIR	AT5G27240	1.00E-93	DNAJ heat shock N-terminal domain-containing protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000253	547565	550633	-

Transcript Sequence
>GWHTAAEX009967 ATGGATTGTAATAAAGAGGAGGCTTCTAGAGCAAAGGACATAGCTGAAAAGAAGATGCAGATCAGGGATTTTGTTGGTGCAAAAAAGTTTCTGCTCAAAGCTTTACAACTTTCCCCAGATATTGAGAATGCATCTCACATGCTGACAGTTTGCGAAGTACATTGCTCTGCTGGAAGCTTGGTTAATGGTCAGACTGATCATTATGGAGTACTTCAGGTAGATGTATCAGCTGATGAAGCATTGATCAGGAAGCAATACCGCAAGCTCGCACTTTTGCTTCATCCTGACAAAAACAAATTTGCAGGTGCTGAAGCTGCCTTTAAGCTTGTTGGAGAAGCATATAAGGTGCTGTCCGATCAAACAAATCGCCAAGTTTACGATTCCAAAAGAAGAGTAATAATAAGGACCACAGCTTCGTGGCAGCCTTCTCAGAATGCTCGAAATGTTAGGAGGTATACTGCCGCAACAATCAATGTTTCAAATAATCAATATGTTGGACCTAAACCGCAGGATCAGCAGCCTCCGACCTCATTTTTTGTTTCCCAATGTTTTTGGACTATGTGTGTGTTTTGCAACAATAGATTTCAATATTCTCGGGCCTGGTTAAATAGAGAGGTACAGTGTCAAAAATGCTACAAGAAATTTCATGCATTTGAGGTAAGTCCTCAAAATGTTCCGCCTCCTGGGTCAAGTTCTGGGTTTGCTTGGAACCACACTGGATTGCATGAAACGTCAATGCCAGTTCAGCATGCTTATAATCATGGGAACCAAACTCATCAGTCGCAGCCTTTAAAACCTGAGTCCGCTACCGTGCATTGTCAAAAAGTCAACCCTTGTGCAGATGGTATGACTGGCAATCTGAAGTCTGAAAATACAAAACCCCAGAATAAGCCATCGTCAAAGCCTCTATCTGGTAAATCCCATCGAATGAGAAATAGGAGGGTAGTAAAATCTAGTGATTCTGAGTCTGCTAAAAGTGATTCCTCTGATAGTATTTCGGAGGTCGATACTGTAGTTCCTGATAGTGGGCCAACAAGTAGCAGGTATCCGAGAAGGTCAACACGATCCAAAATAAATGTCACATACAAAGAAGTTGAAAGTGAAGAAGATGATTTTGGGAGTCGTCGTAAAAGGTTACGAAAGGTTGGTTCATTTGGCTTTAAGAACCAGGGCGGCTCATCTCCGAAAGTAGCAACTAATGGTGTGAAAATAAATACCACTGAGGGTTCTTTTTCTGAAGGCACGGTTAAGGCAGAGCAGACAGGCCATGAACCTTTCAAAGATGGTTTACCAAAAGCAAGTGTTCAAGGGTGTGGAATGATGCATGAAAGAAGGGGAACAATTGGGAAAAGTGATGAAAAGCAAGTTGGAGAAAAATCAAATGCAACTTCTGCATTTGGTTCAAGATCTAGTAAGCCACAGACTATCTCATCGTTCTCTTTTCCTGACCCAGAATTCTATGACTTCGACAACGATAGACATCAGAGTAGCTTTGCAGTGAATCAAATCTGGGCAGTTTATGATGATGCTGATGGAATGCCTCGGTTTTATGCTCTGATTAACAAAATTTTTACACCAAACTTCAAGTTACAGTTCATCTGGTTAGAGAACAATCCTATAAGTGCAGCTGAGAAAGCATGGGTTTCAGCTGACCTGCCTATTGCTTGTGGTAATTTCTCTCTTGGAAAAACCAGCACCGCAAGAAGTCAGGAGATGTTCTCTCATCTAATTTTTACGGCAGAGAAAAGTAGAGAAAATATATATTTTATCTATCCTAAGCAGGGTGAGGTTTGGGCCCTTTTTAAGGATTGGGATGTAGGATGGAGTTCTCCAGAAAAAAGGCCTGGGAATTATATGTATGAATTTGTTGAAGTTATTTCAAATTTTGCATATGGCAAAGACATTAGAGTTAGTCATCTGGTCAAGGTCAATGGATTTCGATATGTGTTTGCTCCAGTTCATGATAAAGGAAATACCATACCGTCAGGACAATTGCTTAAGTTCTCTCACCGTATACCTTCTTATAAAGTTTGTGAAGATAGAGAAGGGATTCCAAGAGGTTCGTTTGAGCTTGATCCAGCTGCTTTGCCTGAGAGTTACGTGATTACAGACAAAGTTAGTGCTGAAACTGTCGAAGTTTCAGATACCAAGTTTGCTGATCCTTTTGGGTCTGTCAAAGATATATCTACTGGAAGTGAAGCTAACCATAAGAACTTGAGATATAGTGAGTGCGTCTTTGAAGCGGATGGTAAAATGGCAGGAGTTCGTGCTTCTACCAATTCAGATGAGATACTCCACAAAGCATCTTCTGAAAGGAGAAGATGCAAAGTTAAAGACTCGGTAACTAGTGATGATGATGAAACCATTTGTTCTGATGCAGATGAGACCCCAAATTCTGAATTTTTTAACTTTCAAGATGTGAGGTCAGAAGAGAAGTTTGAGCAAGGTCAGCTTTGGGCGCTTTATAGCGACATAGATGAGTATCCCAACTACTATGCTTGGATACGGAAGGTTGAATGGGAAGAGTCTGGATGCATCACTGTAAAGTGGTTAGAGCATTCCCCTGAGACGCAGGCCGAGCAATTTTGGCATGACAATGGCCTTGCTTTTTCCTGTGGAAAATTCAAAGTTGTGCCAGGCATCGATCAATTTACTACGACTGATACATTCTCTCATATGGTGCTAGCAAAACCAATGAAAAAAAATGAATTGTATGAGATATATCCAAACAGAGGCGAGATTTGGGCTGCATACAAGAACTGGAGCATCATGTGGACACCCGAAGATGTGCAAAAGGTTGCCGATTTTGATGTCATAGAGATTGTTGAACGAAATGAGTATGCCATTAAAGCCGTGACCCTGACTAAAGTAAAGGGTTACAATTATGTCTTCAAGCCCATGTCTAGAGGCGTGACTAACATTGTGATACCCATTGAGGAATGTTTGAGATTCTCTCATCAAATACCTGCATTTAGATTAACTGAACAAGCATCTGCAGAACTTCAAGACTGTTGGGAGCTTGATCCTGATTCCATTCCAAAGATCTTATTGTTGAAGAACTCAAGTTGA

Network for GWHGAAEX009967

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00226.30	DnaJ	66	127	5.10E-21
PF11926.7	DUF3444	478	679	7.30E-69
PF11926.7	DUF3444	795	996	1.00E-59

Protein Sequence

>GWHPAAEX009967
MDCNKEEASRAKDIAEKKMQIRDFVGAKKFLLKALQLSPDIENASHMLTVCEVHCSAGSLVNGQTDHYGVLQVDVSADEALIRKQYRKLALLLHPDKNKFAGAEAAFKLVGEAYKVLSDQTNRQVYDSKRRVIIRTTASWQPSQNARNVRRYTAATINVSNNQYVGPKPQDQQPPTSFFVSQCFWTMCVFCNNRFQYSRAWLNREVQCQKCYKKFHAFEVSPQNVPPPGSSSGFAWNHTGLHETSMPVQHAYNHGNQTHQSQPLKPESATVHCQKVNPCADGMTGNLKSENTKPQNKPSSKPLSGKSHRMRNRRVVKSSDSESAKSDSSDSISEVDTVVPDSGPTSSRYPRRSTRSKINVTYKEVESEEDDFGSRRKRLRKVGSFGFKNQGGSSPKVATNGVKINTTEGSFSEGTVKAEQTGHEPFKDGLPKASVQGCGMMHERRGTIGKSDEKQVGEKSNATSAFGSRSSKPQTISSFSFPDPEFYDFDNDRHQSSFAVNQIWAVYDDADGMPRFYALINKIFTPNFKLQFIWLENNPISAAEKAWVSADLPIACGNFSLGKTSTARSQEMFSHLIFTAEKSRENIYFIYPKQGEVWALFKDWDVGWSSPEKRPGNYMYEFVEVISNFAYGKDIRVSHLVKVNGFRYVFAPVHDKGNTIPSGQLLKFSHRIPSYKVCEDREGIPRGSFELDPAALPESYVITDKVSAETVEVSDTKFADPFGSVKDISTGSEANHKNLRYSECVFEADGKMAGVRASTNSDEILHKASSERRRCKVKDSVTSDDDETICSDADETPNSEFFNFQDVRSEEKFEQGQLWALYSDIDEYPNYYAWIRKVEWEESGCITVKWLEHSPETQAEQFWHDNGLAFSCGKFKVVPGIDQFTTTDTFSHMVLAKPMKKNELYEIYPNRGEIWAAYKNWSIMWTPEDVQKVADFDVIEIVERNEYAIKAVTLTKVKGYNYVFKPMSRGVTNIVIPIEECLRFSHQIPAFRLTEQASAELQDCWELDPDSIPKILLLKNSS

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	21.990
SRP064423	SRR2545915	Juvenile tuber	22.600
SRP108465	SRR5643513	five period of Gastrodia elata	18.150
	SRR5643514	five period of Gastrodia elata	18.160
	SRR5643515	five period of Gastrodia elata	19.840
	SRR5643524	five period of Gastrodia elata	16.720
	SRR5643525	five period of Gastrodia elata	14.260
	SRR5643528	five period of Gastrodia elata	14.620
	SRR5643658	five period of Gastrodia elata	14.510
	SRR5643659	five period of Gastrodia elata	24.560
	SRR5643660	five period of Gastrodia elata	23.700
	SRR5643661	five period of Gastrodia elata	21.450
	SRR5643662	five period of Gastrodia elata	23.900
	SRR5643663	five period of Gastrodia elata	22.280
	SRR5643664	five period of Gastrodia elata	21.700
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	18.620
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	18.140
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	20.250
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	18.620
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	20.600
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	22.550
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	22.130
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	22.220
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	21.930
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	24.750
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	19.930
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	19.930
SRP279888	Gastro	Gastrodia elata tuber	18.69
	Juven	Juvenile tuber	18.87
	Mother_Gastro	Mother tuber of Gastrodia elata	16.58
	Mother_Juven	Mother tuber of Juvenile	15.05