Detail information of GWHGAAEX009975/evm.TU.scaffold_261.42


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG28858.00E-87Uncharacterized conserved protein
nrgi|695073696|ref|XP_009384023.1|2.96E-114PREDICTED: ribosomal RNA-processing protein 14-C-like [Musa acuminata subsp. malaccensis]
trEMBLtr|A0A061EN28|A0A061EN28_THECC1.00E-95Caldesmon, putative {ECO:0000313|EMBL:EOY06236.1}
TAIRAT5G052108.00E-87Surfeit locus protein 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000253642040643086-
Transcript Sequence

Network for GWHGAAEX009975

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF15459.5RRP147682.80E-17
PF04935.11SURF61513257.40E-22
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms43.800
SRR2545915Juvenile tuber38.510
SRP108465SRR5643513five period of Gastrodia elata33.120
SRR5643514five period of Gastrodia elata26.460
SRR5643515five period of Gastrodia elata26.110
SRR5643524five period of Gastrodia elata26.940
SRR5643525five period of Gastrodia elata21.020
SRR5643528five period of Gastrodia elata18.540
SRR5643658five period of Gastrodia elata19.590
SRR5643659five period of Gastrodia elata47.100
SRR5643660five period of Gastrodia elata38.180
SRR5643661five period of Gastrodia elata48.590
SRR5643662five period of Gastrodia elata51.160
SRR5643663five period of Gastrodia elata46.280
SRR5643664five period of Gastrodia elata53.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_135.080
SRR6049655Rhizomagastrodiae_C368-T10_good_124.230
SRR6049656Rhizomagastrodiae_C368-T07_good_137.130
SRR6049657Rhizomagastrodiae_C368-T07_good_131.590
SRR6049658Rhizomagastrodiae_C368-T04_good_135.830
SRR6049659Rhizomagastrodiae_C368-T04_good_135.980
SRR6049660Rhizomagastrodiae_C368-T01_good_136.670
SRR6049661Rhizomagastrodiae_C368-T04_good_139.060
SRR6049662Rhizomagastrodiae_C368-T01_good_133.930
SRR6049663Rhizomagastrodiae_C368-T01_good_136.480
SRR6049664Rhizomagastrodiae_C368-T10_good_134.700
SRR6049665Rhizomagastrodiae_C368-T10_good_134.700
SRP279888GastroGastrodia elata tuber 53.99
JuvenJuvenile tuber51.28
Mother_GastroMother tuber of Gastrodia elata 22.21
Mother_JuvenMother tuber of Juvenile 33.94