Detail information of GWHGAAEX009976/evm.TU.scaffold_2616.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262199085|ref|YP_003270294.1|2.00E-75ATP-dependent protease La [Haliangium ochraceum DSM 14365]
KOGKOG20045.00E-136Mitochondrial ATP-dependent protease PIM1/LON
nrgi|698539948|ref|XP_009765598.1|5.69E-146PREDICTED: lon protease homolog 2, peroxisomal isoform X2 [Nicotiana sylvestris]
Swissprottr|O04979|LONP2_SPIOL3.00E-144Lon protease homolog 2, peroxisomal {ECO:0000255|HAMAP-Rule:MF_03121}
trEMBLtr|M0RXX8|M0RXX8_MUSAM1.00E-145Lon protease homolog 2, peroxisomal {ECO:0000256|HAMAP-Rule:MF_03121}
TAIRAT5G470405.00E-136lon protease 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000026088352690+
Transcript Sequence

Network for GWHGAAEX009976

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05362.12Lon_C902837.90E-77
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01338lon Cell cycle - Caulobacter map04112

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0004252Molecular Functionserine-type endopeptidase activity
GO:0004176Molecular FunctionATP-dependent peptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms32.040
SRR2545915Juvenile tuber30.440
SRP108465SRR5643513five period of Gastrodia elata27.670
SRR5643514five period of Gastrodia elata24.170
SRR5643515five period of Gastrodia elata23.520
SRR5643524five period of Gastrodia elata24.590
SRR5643525five period of Gastrodia elata38.140
SRR5643528five period of Gastrodia elata32.200
SRR5643658five period of Gastrodia elata38.510
SRR5643659five period of Gastrodia elata24.480
SRR5643660five period of Gastrodia elata26.350
SRR5643661five period of Gastrodia elata25.280
SRR5643662five period of Gastrodia elata23.350
SRR5643663five period of Gastrodia elata25.910
SRR5643664five period of Gastrodia elata26.540
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_139.670
SRR6049655Rhizomagastrodiae_C368-T10_good_134.800
SRR6049656Rhizomagastrodiae_C368-T07_good_130.240
SRR6049657Rhizomagastrodiae_C368-T07_good_145.830
SRR6049658Rhizomagastrodiae_C368-T04_good_155.590
SRR6049659Rhizomagastrodiae_C368-T04_good_156.330
SRR6049660Rhizomagastrodiae_C368-T01_good_145.060
SRR6049661Rhizomagastrodiae_C368-T04_good_145.410
SRR6049662Rhizomagastrodiae_C368-T01_good_125.530
SRR6049663Rhizomagastrodiae_C368-T01_good_130.540
SRR6049664Rhizomagastrodiae_C368-T10_good_126.010
SRR6049665Rhizomagastrodiae_C368-T10_good_126.010
SRP279888GastroGastrodia elata tuber 42.94
JuvenJuvenile tuber39.88
Mother_GastroMother tuber of Gastrodia elata 57.31
Mother_JuvenMother tuber of Juvenile 52.88