Detail information of GWHGAAEX009977/evm.TU.scaffold_262.1_evm.TU.scaffold_262.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|91781868|ref|YP_557074.1|3.00E-152FAD-binding oxidase [Burkholderia xenovorans LB400]
KOGKOG12310Proteins containing the FAD binding domain
nrgi|743872963|ref|XP_010906694.1|0PREDICTED: D-lactate dehydrogenase [cytochrome], mitochondrial isoform X1 [Elaeis guineensis]
Swissprottr|Q94AX4|DLD_ARATH0D-lactate dehydrogenase [cytochrome], mitochondrial (Precursor)
trEMBLtr|A0A061EY30|A0A061EY30_THECC0FAD-linked oxidases family protein isoform 1 {ECO:0000313|EMBL:EOY09666.1}
TAIRAT5G065800FAD-linked oxidases family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000026027434133134-
Transcript Sequence

Network for GWHGAAEX009977

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01565.22FAD_binding_41382743.20E-36
PF02913.18FAD-oxidase_C3115525.60E-60
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00102LDHD, dld Metabolic pathways map01100
Pyruvate metabolismmap00620

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0050660Molecular Functionflavin adenine dinucleotide binding
GO:0071949Molecular FunctionFAD binding
GO:0016491Molecular Functionoxidoreductase activity
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms30.210
SRR2545915Juvenile tuber36.370
SRP108465SRR5643513five period of Gastrodia elata26.860
SRR5643514five period of Gastrodia elata26.320
SRR5643515five period of Gastrodia elata24.410
SRR5643524five period of Gastrodia elata26.990
SRR5643525five period of Gastrodia elata12.650
SRR5643528five period of Gastrodia elata13.240
SRR5643658five period of Gastrodia elata14.470
SRR5643659five period of Gastrodia elata22.940
SRR5643660five period of Gastrodia elata24.500
SRR5643661five period of Gastrodia elata23.200
SRR5643662five period of Gastrodia elata19.550
SRR5643663five period of Gastrodia elata21.790
SRR5643664five period of Gastrodia elata20.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_134.390
SRR6049655Rhizomagastrodiae_C368-T10_good_132.270
SRR6049656Rhizomagastrodiae_C368-T07_good_131.740
SRR6049657Rhizomagastrodiae_C368-T07_good_139.790
SRR6049658Rhizomagastrodiae_C368-T04_good_138.890
SRR6049659Rhizomagastrodiae_C368-T04_good_142.830
SRR6049660Rhizomagastrodiae_C368-T01_good_137.700
SRR6049661Rhizomagastrodiae_C368-T04_good_140.100
SRR6049662Rhizomagastrodiae_C368-T01_good_129.680
SRR6049663Rhizomagastrodiae_C368-T01_good_128.060
SRR6049664Rhizomagastrodiae_C368-T10_good_124.860
SRR6049665Rhizomagastrodiae_C368-T10_good_124.860
SRP279888GastroGastrodia elata tuber 20.56
JuvenJuvenile tuber17.62
Mother_GastroMother tuber of Gastrodia elata 12.31
Mother_JuvenMother tuber of Juvenile 14.72