Detail information of GWHGAAEX009978/evm.TU.scaffold_262.3


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000260160649164307+
Transcript Sequence

Network for GWHGAAEX009978

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02725PSMA1 Proteasome map03050

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.740
SRR2545915Juvenile tuber5.040
SRP108465SRR5643513five period of Gastrodia elata2.160
SRR5643514five period of Gastrodia elata2.110
SRR5643515five period of Gastrodia elata3.990
SRR5643524five period of Gastrodia elata3.800
SRR5643525five period of Gastrodia elata2.170
SRR5643528five period of Gastrodia elata8.940
SRR5643658five period of Gastrodia elata1.270
SRR5643659five period of Gastrodia elata0.850
SRR5643660five period of Gastrodia elata1.920
SRR5643661five period of Gastrodia elata1.910
SRR5643662five period of Gastrodia elata0.500
SRR5643663five period of Gastrodia elata2.190
SRR5643664five period of Gastrodia elata0.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.690
SRR6049655Rhizomagastrodiae_C368-T10_good_18.130
SRR6049656Rhizomagastrodiae_C368-T07_good_10.590
SRR6049657Rhizomagastrodiae_C368-T07_good_12.090
SRR6049658Rhizomagastrodiae_C368-T04_good_16.040
SRR6049659Rhizomagastrodiae_C368-T04_good_12.840
SRR6049660Rhizomagastrodiae_C368-T01_good_13.820
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_13.540
SRR6049663Rhizomagastrodiae_C368-T01_good_10.490
SRR6049664Rhizomagastrodiae_C368-T10_good_12.470
SRR6049665Rhizomagastrodiae_C368-T10_good_12.470
SRP279888GastroGastrodia elata tuber 2.56
JuvenJuvenile tuber2.25
Mother_GastroMother tuber of Gastrodia elata 2.45
Mother_JuvenMother tuber of Juvenile 0.75