Detail information of GWHGAAEX009991/evm.TU.scaffold_263.1
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|410667296|ref|YP_006919667.1| | 2.00E-131 | pyruvate kinase Pyk [Thermacetogenium phaeum DSM 12270] |
| KOG | KOG2323 | 0 | Pyruvate kinase |
| nr | gi|475653385|gb|AGI60277.1| | 0 | pyruvate kinase [Dendrobium catenatum] |
| Swissprot | tr|P22200|KPYC_SOLTU | 0 | Pyruvate kinase, cytosolic isozyme |
| trEMBL | tr|A0A067KZP4|A0A067KZP4_JATCU | 0 | Pyruvate kinase {ECO:0000256|RuleBase:RU000504} |
| TAIR | AT5G08570 | 0 | Pyruvate kinase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000256 | 2293 | 12070 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009991
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00224.20 | PK | 20 | 363 | 1.30E-157 |
| PF02887.15 | PK_C | 380 | 506 | 5.70E-24 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006096 | Biological Process | glycolytic process |
| GO:0000287 | Molecular Function | magnesium ion binding |
| GO:0030955 | Molecular Function | potassium ion binding |
| GO:0004743 | Molecular Function | pyruvate kinase activity |
| GO:0003824 | Molecular Function | catalytic activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 4.810 |
| SRR2545915 | Juvenile tuber | 4.360 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 12.420 |
| SRR5643514 | five period of Gastrodia elata | 26.410 | |
| SRR5643515 | five period of Gastrodia elata | 17.520 | |
| SRR5643524 | five period of Gastrodia elata | 23.610 | |
| SRR5643525 | five period of Gastrodia elata | 7.080 | |
| SRR5643528 | five period of Gastrodia elata | 9.890 | |
| SRR5643658 | five period of Gastrodia elata | 3.990 | |
| SRR5643659 | five period of Gastrodia elata | 9.940 | |
| SRR5643660 | five period of Gastrodia elata | 11.710 | |
| SRR5643661 | five period of Gastrodia elata | 10.150 | |
| SRR5643662 | five period of Gastrodia elata | 9.850 | |
| SRR5643663 | five period of Gastrodia elata | 8.300 | |
| SRR5643664 | five period of Gastrodia elata | 7.440 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 14.260 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 16.600 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 15.870 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 7.660 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 13.040 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 10.110 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 7.810 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 8.440 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 23.000 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 18.280 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 29.510 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 29.510 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 7.33 |
| Juven | Juvenile tuber | 4.56 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 4.25 | |
| Mother_Juven | Mother tuber of Juvenile | 5.70 |