Detail information of GWHGAAEX009997/evm.TU.scaffold_263.7


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG32959.00E-1760S Ribosomal protein L13
nrgi|357144871|ref|XP_003573442.1|2.09E-27PREDICTED: 60S ribosomal protein L13-1-like [Brachypodium distachyon]
Swissprottr|P41128|RL131_BRANA6.00E-2260S ribosomal protein L13-1
trEMBLtr|I1I1B1|I1I1B1_BRADI8.00E-2860S ribosomal protein L13 {ECO:0000256|RuleBase:RU000572}
TAIRAT3G490109.00E-17breast basic conserved 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000256151559152153-
Transcript Sequence

Network for GWHGAAEX009997

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02873RP-L13e, RPL13 Ribosome map03010

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.290
SRR2545915Juvenile tuber8.760
SRP108465SRR5643513five period of Gastrodia elata1.090
SRR5643514five period of Gastrodia elata2.550
SRR5643515five period of Gastrodia elata2.510
SRR5643524five period of Gastrodia elata1.700
SRR5643525five period of Gastrodia elata0.730
SRR5643528five period of Gastrodia elata3.940
SRR5643658five period of Gastrodia elata3.420
SRR5643659five period of Gastrodia elata4.700
SRR5643660five period of Gastrodia elata9.680
SRR5643661five period of Gastrodia elata3.850
SRR5643662five period of Gastrodia elata4.060
SRR5643663five period of Gastrodia elata6.610
SRR5643664five period of Gastrodia elata6.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.820
SRR6049655Rhizomagastrodiae_C368-T10_good_13.290
SRR6049656Rhizomagastrodiae_C368-T07_good_11.790
SRR6049657Rhizomagastrodiae_C368-T07_good_14.740
SRR6049658Rhizomagastrodiae_C368-T04_good_14.270
SRR6049659Rhizomagastrodiae_C368-T04_good_16.440
SRR6049660Rhizomagastrodiae_C368-T01_good_18.810
SRR6049661Rhizomagastrodiae_C368-T04_good_16.080
SRR6049662Rhizomagastrodiae_C368-T01_good_12.550
SRR6049663Rhizomagastrodiae_C368-T01_good_15.990
SRR6049664Rhizomagastrodiae_C368-T10_good_12.500
SRR6049665Rhizomagastrodiae_C368-T10_good_12.500
SRP279888GastroGastrodia elata tuber 14.45
JuvenJuvenile tuber7.69
Mother_GastroMother tuber of Gastrodia elata 44.49
Mother_JuvenMother tuber of Juvenile 6.58