Gene detail

Detail information of GWHGAAEX010000/evm.TU.scaffold_263.10

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG2088	4.00E-156	Predicted lipase/calmodulin-binding heat-shock protein
nr	gi\|695008509\|ref\|XP_009390850.1\|	4.25E-180	PREDICTED: sn1-specific diacylglycerol lipase alpha-like [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0SB35\|M0SB35_MUSAM	5.00E-178	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P02170_001}
TAIR	AT5G37710	4.00E-156	alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000256	231629	258239	-

Transcript Sequence
>GWHTAAEX010000 CGGCTTTCGTGTGCGCGCTGCCGCCATTTTCCACTGCCTTCAAAATCCTGACTTTTTGTTTCCTCTTCTTCTAGAACAGTTGAGCAAGAACACGGCAGATTAAAAAATGGTCTCAATGAGAGACCTGTATGATTCCGCCCTCTCCCAGCGGGCTGCGACGTCTTTCAAGTTCATATCCCAATCGCTTTTGGGCATCCTTGTCAGATGCCAGCTTCTTGCTGTGGAGGCATCGAATGCATCCTCTGCGCCACCTGCTCCCGCTGGGCCTGGCGCCGCTGTTCCCACTCCGGCTCTCACGACAGCGCCTCTTGGGCCCGCGCTTCGTTCACAGATTTCGAGCCCATTCCACGAGCTTGCCGCGCCATCCTCGCATCATACGAAGACGATCTTTTCCATCCGCGCTGGGTGCCACTCCCATTCGGATATGGCATCGATCCCTCCTCCATTATCCGCCGTGCCTCCTACGCCGACACCGCCGACCGCTGCCCTCCCTATTTTATATATTTGGACCGACTCAACTCTGAGGTTGTTGTTGCAGTTCGAGGCCTCAACCTAGGCCGCGTTGCAGATTACCGCCTCCTCCTCGACAACCGGCCTGAGTCTCAGCGCTTTAATGGCGGCTACGTGCACCGGGGACTTCTCAAAGCCGCTGTTTGGGTTTTGAATCGCGAAGCAGAGACGCTGCGAGAGGTTTTAAGGGAAGCAGGACCAGAATGTCGGCTGGTGTTCGCTGGGCATTCTTTAGGTGCAGGGGTGGCCGCGTTGATGGCAGCCGTTGCTGTTCATTGTCTGGACCGCTTTGGAGGGATTCGGAGGGACAGAGTGAGATGTTATTCCGTGGCGCCCGCAAGGTGTATGTCTATTGACTTAGCTGTCAAGTACGCCGATGTCATACACTCTGTCGTGCTACAGGATGACTTTTTGCCAAGAACGCCTACTCCGTTAGAGAATATCTTTGGATCTATTTTCTGTTTACCTTGTTTGCTATTTTTAGTTTGCATGAGGGATACATTCATACCCGAGGATAAAATTCTTAAAGATCCCAAAAGACTTTATGCTCCAGGCAGAATGTATCATATTGTTGAGAGAAAACAATGCGGCTGTGGGCGAATGCCTCCTGTTGTTAAAACTGCTATTCCACTTGAAGAGAGATTCGAGCACATTGTGTTATCATGTAATGCTGTTTATGATCATTCCCTTGTTTGGATAGAACGAGAAGCACAGAAGGCTCTAGATATAATGCAAGAAAGCTATGAAGCTATGCTCCCTCCTATACATCCTATAATTGCAAGGGATGAATCCCTCCTTGACAGAGAGTACAAGGATGCACTTGATAAGGCTGCATTTTTTACTACACACGAAGCCTTCACTTCGGATAATGAAGCCAATGAAGAAATTTACAATCCACTTGATTATGACCACGAAGGCATTAGCTCTGAACAGTCAGATTCTGATTGAGAAGGATTGGTGGAGAGGTTGTTTGATGACAATGAAGCTGAAGGCTAGGAGCCTAAGGAAATGAGCTGTATTAAAGATGCCAGCAAGCATTCTTTCACACACCAGTGATTCCTATACTTGTACAGTGATATTTTTTCATTCTATTGTGTAAATTTTTTATGTTAGATTTCCCAAATCAATTCAGAGTATATCTGTAATAGAAGAAATTCCATGATAGGTTTTTGTGAAAAGCATTGAACATGGAGTTCTTATCTATTTATCTCTCATGATTTAATTTTGATGATCACAAAGTATAAATTTTTTTGCATAGATCCGATGACATTTATCTAGTGC

Network for GWHGAAEX010000

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03893.15	Lipase3_N	9	69	7.50E-11
PF01764.24	Lipase_3	109	245	3.50E-19

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006629	Biological Process	lipid metabolic process
GO:0016042	Biological Process	lipid catabolic process

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.650
SRP064423	SRR2545915	Juvenile tuber	0.390
SRP108465	SRR5643513	five period of Gastrodia elata	1.380
	SRR5643514	five period of Gastrodia elata	0.730
	SRR5643515	five period of Gastrodia elata	2.330
	SRR5643524	five period of Gastrodia elata	2.150
	SRR5643525	five period of Gastrodia elata	0.260
	SRR5643528	five period of Gastrodia elata	5.450
	SRR5643658	five period of Gastrodia elata	0.370
	SRR5643659	five period of Gastrodia elata	1.790
	SRR5643660	five period of Gastrodia elata	1.070
	SRR5643661	five period of Gastrodia elata	2.310
	SRR5643662	five period of Gastrodia elata	0.990
	SRR5643663	five period of Gastrodia elata	0.760
	SRR5643664	five period of Gastrodia elata	0.920
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.870
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.470
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.860
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.980
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.040
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.180
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.870
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.760
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.370
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.820
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.440
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.440
SRP279888	Gastro	Gastrodia elata tuber	0.48
	Juven	Juvenile tuber	0.15
	Mother_Gastro	Mother tuber of Gastrodia elata	27.15
	Mother_Juven	Mother tuber of Juvenile	39.45