Detail information of GWHGAAEX010005/evm.TU.scaffold_263.18


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|719965627|ref|XP_010257049.1|1.35E-57PREDICTED: transcription factor bHLH47-like [Nelumbo nucifera]
Swissprottr|Q9SN74|BH047_ARATH3.00E-29Transcription factor bHLH47
trEMBLtr|M0U8N6|M0U8N6_MUSAM8.00E-50Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP12770_001}
TAIRAT3G476401.00E-28basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000256507277512313+
Transcript Sequence

Network for GWHGAAEX010005

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.350
SRR2545915Juvenile tuber25.350
SRP108465SRR5643513five period of Gastrodia elata33.410
SRR5643514five period of Gastrodia elata27.440
SRR5643515five period of Gastrodia elata33.380
SRR5643524five period of Gastrodia elata27.300
SRR5643525five period of Gastrodia elata38.410
SRR5643528five period of Gastrodia elata31.240
SRR5643658five period of Gastrodia elata33.340
SRR5643659five period of Gastrodia elata26.320
SRR5643660five period of Gastrodia elata34.710
SRR5643661five period of Gastrodia elata34.810
SRR5643662five period of Gastrodia elata34.040
SRR5643663five period of Gastrodia elata26.610
SRR5643664five period of Gastrodia elata35.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_136.100
SRR6049655Rhizomagastrodiae_C368-T10_good_138.690
SRR6049656Rhizomagastrodiae_C368-T07_good_134.250
SRR6049657Rhizomagastrodiae_C368-T07_good_136.530
SRR6049658Rhizomagastrodiae_C368-T04_good_141.660
SRR6049659Rhizomagastrodiae_C368-T04_good_147.690
SRR6049660Rhizomagastrodiae_C368-T01_good_137.600
SRR6049661Rhizomagastrodiae_C368-T04_good_142.300
SRR6049662Rhizomagastrodiae_C368-T01_good_132.050
SRR6049663Rhizomagastrodiae_C368-T01_good_140.540
SRR6049664Rhizomagastrodiae_C368-T10_good_130.050
SRR6049665Rhizomagastrodiae_C368-T10_good_130.050
SRP279888GastroGastrodia elata tuber 38.48
JuvenJuvenile tuber18.84
Mother_GastroMother tuber of Gastrodia elata 53.24
Mother_JuvenMother tuber of Juvenile 27.00