Detail information of GWHGAAEX010014/evm.TU.scaffold_265.3
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|313674204|ref|YP_004052200.1| | 2.00E-145 | histidinol dehydrogenase [Marivirga tractuosa DSM 4126] |
| KOG | KOG2697 | 0 | Histidinol dehydrogenase |
| nr | gi|743792523|ref|XP_010923703.1| | 0 | PREDICTED: histidinol dehydrogenase, chloroplastic isoform X1 [Elaeis guineensis] |
| Swissprot | tr|Q5NAY4|HISX_ORYSJ | 0 | Histidinol dehydrogenase, chloroplastic (Precursor) |
| trEMBL | tr|A0A096UMD6|A0A096UMD6_WHEAT | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_2BL_A22973E4C.2} |
| TAIR | AT5G63890 | 0 | histidinol dehydrogenase |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000263 | 116243 | 142517 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010014
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00815.19 | Histidinol_dh | 70 | 477 | 4.20E-157 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00013 | hisD | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Biosynthesis of amino acids | map01230 | ||
| Histidine metabolism | map00340 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0000105 | Biological Process | histidine biosynthetic process |
| GO:0016491 | Molecular Function | oxidoreductase activity |
| GO:0051287 | Molecular Function | NAD binding |
| GO:0004399 | Molecular Function | histidinol dehydrogenase activity |
| GO:0008270 | Molecular Function | zinc ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 23.510 |
| SRR2545915 | Juvenile tuber | 23.480 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 23.700 |
| SRR5643514 | five period of Gastrodia elata | 24.220 | |
| SRR5643515 | five period of Gastrodia elata | 24.780 | |
| SRR5643524 | five period of Gastrodia elata | 23.080 | |
| SRR5643525 | five period of Gastrodia elata | 23.780 | |
| SRR5643528 | five period of Gastrodia elata | 18.050 | |
| SRR5643658 | five period of Gastrodia elata | 21.110 | |
| SRR5643659 | five period of Gastrodia elata | 28.370 | |
| SRR5643660 | five period of Gastrodia elata | 28.450 | |
| SRR5643661 | five period of Gastrodia elata | 27.990 | |
| SRR5643662 | five period of Gastrodia elata | 31.560 | |
| SRR5643663 | five period of Gastrodia elata | 30.560 | |
| SRR5643664 | five period of Gastrodia elata | 31.590 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 26.100 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 32.290 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 27.200 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 24.530 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 23.710 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 21.010 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 24.980 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 27.380 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 35.410 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 32.460 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 32.050 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 32.050 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 33.05 |
| Juven | Juvenile tuber | 36.34 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 19.28 | |
| Mother_Juven | Mother tuber of Juvenile | 20.82 |