Detail information of GWHGAAEX010015/evm.TU.scaffold_265.4
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|392377852|ref|YP_004985011.1| | 6.00E-14 | glycosyl transferase group 1 (modular protein), partial [Azospirillum brasilense Sp245] |
| nr | gi|326530470|dbj|BAJ97661.1| | 7.69E-149 | predicted protein [Hordeum vulgare subsp. vulgare] |
| trEMBL | tr|F2DRE0|F2DRE0_HORVD | 3.00E-149 | Predicted protein {ECO:0000313|EMBL:BAJ97661.1} |
| TAIR | AT2G13290 | 6.00E-137 | beta-1,4-N-acetylglucosaminyltransferase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000263 | 144530 | 145621 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010015
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF04724.12 | Glyco_transf_17 | 18 | 357 | 1.50E-143 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00737 | MGAT3 | Metabolic pathways | map01100 |
| N-Glycan biosynthesis | map00510 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006487 | Biological Process | protein N-linked glycosylation |
| GO:0003830 | Molecular Function | beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 3.520 |
| SRR2545915 | Juvenile tuber | 4.220 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 40.260 |
| SRR5643514 | five period of Gastrodia elata | 55.650 | |
| SRR5643515 | five period of Gastrodia elata | 52.750 | |
| SRR5643524 | five period of Gastrodia elata | 51.970 | |
| SRR5643525 | five period of Gastrodia elata | 16.470 | |
| SRR5643528 | five period of Gastrodia elata | 26.770 | |
| SRR5643658 | five period of Gastrodia elata | 12.750 | |
| SRR5643659 | five period of Gastrodia elata | 35.550 | |
| SRR5643660 | five period of Gastrodia elata | 35.280 | |
| SRR5643661 | five period of Gastrodia elata | 42.370 | |
| SRR5643662 | five period of Gastrodia elata | 25.860 | |
| SRR5643663 | five period of Gastrodia elata | 71.260 | |
| SRR5643664 | five period of Gastrodia elata | 17.510 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 52.310 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 91.600 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 48.650 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 46.760 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 49.700 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 43.260 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 44.560 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 45.030 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 51.760 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 57.330 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 66.000 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 66.000 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 11.53 |
| Juven | Juvenile tuber | 35.27 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 70.78 | |
| Mother_Juven | Mother tuber of Juvenile | 53.07 |