Detail information of GWHGAAEX010016/evm.TU.scaffold_265.6


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428315789|ref|YP_007113671.1|8.00E-25Patatin [Oscillatoria nigro-viridis PCC 7112]
KOGKOG05138.00E-108Ca2+-independent phospholipase A2
nrgi|743864678|ref|XP_010904638.1|1.54E-156PREDICTED: patatin-like protein 3 [Elaeis guineensis]
Swissprottr|Q9SV43|PLP7_ARATH2.00E-108Patatin-like protein 7
trEMBLtr|A0A067GQ16|A0A067GQ16_CITSI3.00E-134Patatin {ECO:0000256|RuleBase:RU361262}
TAIRAT3G549508.00E-108patatin-like protein 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000263148735152421-
Transcript Sequence

Network for GWHGAAEX010016

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0006629Biological Processlipid metabolic process

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.810
SRR2545915Juvenile tuber8.250
SRP108465SRR5643513five period of Gastrodia elata19.000
SRR5643514five period of Gastrodia elata33.340
SRR5643515five period of Gastrodia elata32.460
SRR5643524five period of Gastrodia elata27.090
SRR5643525five period of Gastrodia elata7.330
SRR5643528five period of Gastrodia elata4.060
SRR5643658five period of Gastrodia elata9.280
SRR5643659five period of Gastrodia elata55.990
SRR5643660five period of Gastrodia elata66.900
SRR5643661five period of Gastrodia elata79.150
SRR5643662five period of Gastrodia elata60.640
SRR5643663five period of Gastrodia elata82.980
SRR5643664five period of Gastrodia elata16.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.750
SRR6049655Rhizomagastrodiae_C368-T10_good_19.050
SRR6049656Rhizomagastrodiae_C368-T07_good_127.720
SRR6049657Rhizomagastrodiae_C368-T07_good_119.890
SRR6049658Rhizomagastrodiae_C368-T04_good_118.020
SRR6049659Rhizomagastrodiae_C368-T04_good_111.510
SRR6049660Rhizomagastrodiae_C368-T01_good_128.390
SRR6049661Rhizomagastrodiae_C368-T04_good_116.200
SRR6049662Rhizomagastrodiae_C368-T01_good_133.920
SRR6049663Rhizomagastrodiae_C368-T01_good_135.640
SRR6049664Rhizomagastrodiae_C368-T10_good_125.070
SRR6049665Rhizomagastrodiae_C368-T10_good_125.070
SRP279888GastroGastrodia elata tuber 30.75
JuvenJuvenile tuber21.07
Mother_GastroMother tuber of Gastrodia elata 4.15
Mother_JuvenMother tuber of Juvenile 2.21