Detail information of GWHGAAEX010022/evm.TU.scaffold_265.12
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|428775970|ref|YP_007167757.1| | 1.00E-137 | ferrochelatase [Halothece sp. PCC 7418] |
| KOG | KOG1321 | 0 | Protoheme ferro-lyase (ferrochelatase) |
| nr | gi|672156341|ref|XP_008797865.1| | 0 | PREDICTED: LOW QUALITY PROTEIN: ferrochelatase-1, chloroplastic-like [Phoenix dactylifera] |
| Swissprot | tr|Q69TB1|HEMH1_ORYSJ | 0 | Ferrochelatase-1, chloroplastic (Precursor) |
| trEMBL | tr|C5XRL6|C5XRL6_SORBI | 0 | Ferrochelatase {ECO:0000256|RuleBase:RU000607} |
| TAIR | AT5G26030 | 0 | ferrochelatase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000263 | 266350 | 304398 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010022
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00762.18 | Ferrochelatase | 116 | 438 | 4.00E-106 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01772 | hemH, FECH | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Porphyrin and chlorophyll metabolism | map00860 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006783 | Biological Process | heme biosynthetic process |
| GO:0004325 | Molecular Function | ferrochelatase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 38.790 |
| SRR2545915 | Juvenile tuber | 43.800 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 32.370 |
| SRR5643514 | five period of Gastrodia elata | 36.500 | |
| SRR5643515 | five period of Gastrodia elata | 34.180 | |
| SRR5643524 | five period of Gastrodia elata | 30.370 | |
| SRR5643525 | five period of Gastrodia elata | 63.080 | |
| SRR5643528 | five period of Gastrodia elata | 111.230 | |
| SRR5643658 | five period of Gastrodia elata | 72.180 | |
| SRR5643659 | five period of Gastrodia elata | 74.200 | |
| SRR5643660 | five period of Gastrodia elata | 59.450 | |
| SRR5643661 | five period of Gastrodia elata | 84.230 | |
| SRR5643662 | five period of Gastrodia elata | 69.470 | |
| SRR5643663 | five period of Gastrodia elata | 86.350 | |
| SRR5643664 | five period of Gastrodia elata | 55.090 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 29.070 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 26.100 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 33.920 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 34.810 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 24.390 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 25.330 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 38.520 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 34.440 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 45.840 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 37.310 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 38.080 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 38.080 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 55.08 |
| Juven | Juvenile tuber | 23.81 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 12.74 | |
| Mother_Juven | Mother tuber of Juvenile | 14.11 |