Gene detail

Detail information of GWHGAAEX010024/evm.TU.scaffold_265.14

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG2798	6.00E-146	Putative trehalase
nr	gi\|743762055\|ref\|XP_010906193.1\|	0	PREDICTED: UPF0586 protein C9orf41 homolog isoform X1 [Elaeis guineensis]
trEMBL	tr\|B9HDF2\|B9HDF2_POPTR	0	Uncharacterized protein {ECO:0000313\|EMBL:EEE91443.2}
TAIR	AT2G32160	6.00E-146	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000263	350175	401610	+

Transcript Sequence
>GWHTAAEX010024 CTCGAGGACTCTTTTTTGCTACATCCCCTCCTGCAGCTCGCTTCCTCCAGGCTCTGAGGGCAGCGCGGCGGAGTCGACAGGAGTCTTTGAACTGCGATCGATGAGTCGAGAATCAGAGGGGCCGCAGAGGCGCTACAGCGAGCTCGAGGAAGCCCTCGAGATCAAGTCACTCCGCAGAATTATAAGCGCTTACATCAATTACTCTGAAGCTGCGGAGGAGGATGTCAAGAGATATGAAAGGTCATTTAGAAAGCTCTCTAATGAGCACAAGGCACTTCTTTCTCATCTTCCACTTAAATACCAAAAGCTTAGACGGTGTATCTCGATAAATTCATTTTTCATCATGAACATGCTTCAGGCATTTGATCCTCCTTTTGACATGAGCCAAGATACCGATCTAGATGGTTATGGCAATGTAGAGCATCCTCCTGATGGCCATCTCTCTACATTTCATTATTCAGAAGAGTGTAGCTCTTATCTGAAGCTGCATGTGCCCGAGAGTAAAAGCTCTGCTTTAGGACCTGAGTTGTCTTGTTGTAGCGGAAGATGTGCACAAGGTCCTTTTAAAAGAAATAACGATAAACAGGAGATTTCCAATGAAAGTTCTTGCAGTCTTGTTGTGAGCATGGATTCATCTAATCGAAACACCGAGCTAATTGATGAACCTAGAGACGATCTCAAATATAATTGCAAATCAAATTCGTCTCACCATGATTCCACTTCTAATGGAAATATATCTTCTCTGCCAAATGATTTGATGGATACCTCGTTAAGGTTGAGTGTACCTTTGGTTGATGTTGACAAGGTACGATGCATTATAAGGAACATTGTGAGAGATTGGGCAGTGGAGGGTCAGAGGGAGCGTGATCAGTGCTATAAACCTATTCTTAAAGAACTTGATCGCCTTTTTCCTAATCGAAGCAAGGAAAGGCCTCCCTGCTGTTTGGTACCTGGTGCTGGACTTGGAAGACTAGCTTTGGAGATTTCATGCCTTGGTTTTTTGAGTCAAGGCAATGAGTTTTCTTATTACATGATGATCTGCTCAAGTTTCATTCTCAACCAAACTGAAGCTGCCAATCAGTGGGTAATATACCCTTGGGTTCACAGTACTAGTAATTCTCTATCAGATGATGATCAGTTTCGTCCTGTCTCATTCCCAGATATTCAACCAGCATGTGCAGGGATCACTGAAGGATTTTCTATGTGTGGAGGTGATTTTGTTGAGGTATATAACGATAAAGATCAAGAAGCTTCTTGGGACGCTGTGGCAACTTGCTTTTTTCTGGATACTGCGCATAACATTGTTGAGTATATTGAAGTGATATCAAAAATTCTCAAAGACGGTGGTGTCTGGATAAACTTCGGTCCGTTGCTTTACCATTTTGCAGATTCATATGGATCTGAGGAAATGTCCATTGAGATCAGTCTAGAAGATGTCAAAAGGATTGCCTTACTATATGGATTTGAATTGGAGATGGAGAAAAACATTGAGACCACATACACTGCAAACCCTCGATCTATGATGCAGAATCATTACTATGCTGCCTTTTGGACAATGAAGAAGAAATCAAAGTTATAAAGGCATCTAAAGGTATCTTTATTTATCAAGCTAAAATTCCAGAACACTGCTACAGTACCCTATTCCGGTGCCCTAACTTTTTTTCAAGTAATTAAATATATTTAATAGTTATAATTATGATTGACTAATTAATCTTAATTATTATGAGTTTAATATTATATTTAAATGTATTAATTGTGTCGGGTACTGAAGCAGCGTTCTTATTTTAAACATGTTTCAAGCTTTGTATGATCACATCACCACCACCCAGCATTAGAATAGAAGAAGACTGATTTTGAGTCCCATCGATCAGTTTGCAAATTAATATTTCTCGACAGCTGTCATTGCTAACAATTATCACATTTTAAAATGGGTTAGATCCGGGTTCTGCAGAACCGGACCCGTTTGCCGGAGTCAGTTTTTCTTCTTTCAAGCTGAACATGTTATTTTTACTCTTTTTTTAATACATTTTGTTTCTATTTTTTTTAAATTAATTTGTTTTTTATTTTTTATTCTATATTTATTAAGAATATGCAAGTATTGATCTTGGAGAGTTTAGGCAGCAGCAGGATAAAAGATGCCTCGATTCTTTTTCCTTTGTGTAAATTATTGCATAATCAAATTTAAAATAGTCGCTTGAAATATATAAAATAAGAAAACGCATACATCTGCAGAAGTAATT

Network for GWHGAAEX010024

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07942.11	N2227	261	522	5.00E-110

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K19787	CARNMT1	Metabolic pathways	map01100
K19787	CARNMT1	Histidine metabolism	map00340

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	52.840
SRP064423	SRR2545915	Juvenile tuber	43.140
SRP108465	SRR5643513	five period of Gastrodia elata	14.680
	SRR5643514	five period of Gastrodia elata	14.160
	SRR5643515	five period of Gastrodia elata	12.810
	SRR5643524	five period of Gastrodia elata	12.630
	SRR5643525	five period of Gastrodia elata	14.300
	SRR5643528	five period of Gastrodia elata	13.090
	SRR5643658	five period of Gastrodia elata	18.010
	SRR5643659	five period of Gastrodia elata	21.920
	SRR5643660	five period of Gastrodia elata	30.350
	SRR5643661	five period of Gastrodia elata	22.020
	SRR5643662	five period of Gastrodia elata	20.750
	SRR5643663	five period of Gastrodia elata	24.190
	SRR5643664	five period of Gastrodia elata	28.660
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	29.180
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	20.420
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	20.880
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	36.540
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	43.960
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	43.680
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	27.850
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	32.450
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	16.950
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	22.700
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	17.000
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	17.000
SRP279888	Gastro	Gastrodia elata tuber	41.85
	Juven	Juvenile tuber	35.06
	Mother_Gastro	Mother tuber of Gastrodia elata	19.75
	Mother_Juven	Mother tuber of Juvenile	25.86