Detail information of GWHGAAEX010025/evm.TU.scaffold_265.15
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|255531589|ref|YP_003091961.1| | 2.00E-40 | fatty acid hydroxylase [Pedobacter heparinus DSM 2366] |
| KOG | KOG0539 | 1.00E-116 | Sphingolipid fatty acid hydroxylase |
| nr | gi|297740876|emb|CBI31058.3| | 2.86E-129 | unnamed protein product [Vitis vinifera] |
| Swissprot | tr|O48916|FAH1_ARATH | 3.00E-117 | Fatty acid 2-hydroxylase 1 |
| trEMBL | tr|D7TKN6|D7TKN6_VITVI | 1.00E-129 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI31058.3} |
| TAIR | AT2G34770 | 1.00E-116 | fatty acid hydroxylase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000263 | 403177 | 411333 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010025
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module7 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF04116.12 | FA_hydroxylase | 119 | 257 | 6.80E-15 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0008610 | Biological Process | lipid biosynthetic process |
| GO:0005506 | Molecular Function | iron ion binding |
| GO:0016491 | Molecular Function | oxidoreductase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 11.600 |
| SRR2545915 | Juvenile tuber | 30.500 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 68.070 |
| SRR5643514 | five period of Gastrodia elata | 95.700 | |
| SRR5643515 | five period of Gastrodia elata | 79.880 | |
| SRR5643524 | five period of Gastrodia elata | 84.590 | |
| SRR5643525 | five period of Gastrodia elata | 87.120 | |
| SRR5643528 | five period of Gastrodia elata | 100.910 | |
| SRR5643658 | five period of Gastrodia elata | 109.170 | |
| SRR5643659 | five period of Gastrodia elata | 31.480 | |
| SRR5643660 | five period of Gastrodia elata | 22.350 | |
| SRR5643661 | five period of Gastrodia elata | 31.690 | |
| SRR5643662 | five period of Gastrodia elata | 22.520 | |
| SRR5643663 | five period of Gastrodia elata | 29.490 | |
| SRR5643664 | five period of Gastrodia elata | 19.620 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 41.720 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 73.650 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 44.750 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 32.610 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 21.000 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 19.490 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 32.160 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 28.840 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 43.300 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 31.520 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 57.180 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 57.180 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 27.43 |
| Juven | Juvenile tuber | 131.45 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 43.08 | |
| Mother_Juven | Mother tuber of Juvenile | 65.53 |