Detail information of GWHGAAEX010034/evm.TU.scaffold_265.25


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|92112913|ref|YP_572841.1|2.00E-603-ketoacyl-ACP reductase [Chromohalobacter salexigens DSM 3043]
KOGKOG07252.00E-95Reductases with broad range of substrate specificities
nrgi|720065954|ref|XP_010276407.1|2.83E-98PREDICTED: short-chain type dehydrogenase/reductase-like [Nelumbo nucifera]
Swissprottr|Q08632|SDR1_PICAB1.00E-82Short-chain type dehydrogenase/reductase
trEMBLtr|I3SQZ5|I3SQZ5_MEDTR3.00E-97Uncharacterized protein {ECO:0000313|EMBL:AFK42687.1}
TAIRAT4G131802.00E-95NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000263578178586409-
Transcript Sequence

Network for GWHGAAEX010034

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13561.5adh_short_C2863181.90E-46
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00059fabG, OAR1 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Fatty acid metabolismmap01212
Fatty acid biosynthesismap00061
Biotin metabolismmap00780
Prodigiosin biosynthesismap00333

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms116.190
SRR2545915Juvenile tuber122.210
SRP108465SRR5643513five period of Gastrodia elata196.510
SRR5643514five period of Gastrodia elata135.530
SRR5643515five period of Gastrodia elata181.010
SRR5643524five period of Gastrodia elata198.410
SRR5643525five period of Gastrodia elata54.470
SRR5643528five period of Gastrodia elata70.600
SRR5643658five period of Gastrodia elata43.730
SRR5643659five period of Gastrodia elata239.790
SRR5643660five period of Gastrodia elata263.360
SRR5643661five period of Gastrodia elata328.230
SRR5643662five period of Gastrodia elata241.120
SRR5643663five period of Gastrodia elata211.730
SRR5643664five period of Gastrodia elata260.010
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1173.010
SRR6049655Rhizomagastrodiae_C368-T10_good_1236.500
SRR6049656Rhizomagastrodiae_C368-T07_good_1181.060
SRR6049657Rhizomagastrodiae_C368-T07_good_1160.410
SRR6049658Rhizomagastrodiae_C368-T04_good_1178.530
SRR6049659Rhizomagastrodiae_C368-T04_good_1155.700
SRR6049660Rhizomagastrodiae_C368-T01_good_1158.900
SRR6049661Rhizomagastrodiae_C368-T04_good_1165.090
SRR6049662Rhizomagastrodiae_C368-T01_good_1135.100
SRR6049663Rhizomagastrodiae_C368-T01_good_1147.530
SRR6049664Rhizomagastrodiae_C368-T10_good_1232.520
SRR6049665Rhizomagastrodiae_C368-T10_good_1232.520
SRP279888GastroGastrodia elata tuber 405.71
JuvenJuvenile tuber343.67
Mother_GastroMother tuber of Gastrodia elata 236.44
Mother_JuvenMother tuber of Juvenile 311.06