Detail information of GWHGAAEX010046/evm.TU.scaffold_268.7
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|154244945|ref|YP_001415903.1| | 8.00E-21 | protein kinase [Xanthobacter autotrophicus Py2] |
| KOG | KOG0698 | 4.00E-137 | Serine/threonine protein phosphatase |
| nr | gi|695018699|ref|XP_009396323.1| | 0 | PREDICTED: protein kinase and PP2C-like domain-containing protein [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q5JJY4|P2C04_ORYSJ | 0 | Probable protein phosphatase 2C 4 |
| trEMBL | tr|M0SNJ9|M0SNJ9_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P13340_001} |
| TAIR | AT2G40860_2 | 4.00E-137 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000265 | 137773 | 164497 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010046
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 30 | 307 | 1.20E-38 |
| PF00481.20 | PP2C | 395 | 638 | 3.40E-62 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | TKL-Pl-3 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0003824 | Molecular Function | catalytic activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 13.340 |
| SRR2545915 | Juvenile tuber | 18.600 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 11.790 |
| SRR5643514 | five period of Gastrodia elata | 13.350 | |
| SRR5643515 | five period of Gastrodia elata | 11.970 | |
| SRR5643524 | five period of Gastrodia elata | 12.090 | |
| SRR5643525 | five period of Gastrodia elata | 10.620 | |
| SRR5643528 | five period of Gastrodia elata | 10.520 | |
| SRR5643658 | five period of Gastrodia elata | 10.350 | |
| SRR5643659 | five period of Gastrodia elata | 15.630 | |
| SRR5643660 | five period of Gastrodia elata | 18.110 | |
| SRR5643661 | five period of Gastrodia elata | 15.510 | |
| SRR5643662 | five period of Gastrodia elata | 18.930 | |
| SRR5643663 | five period of Gastrodia elata | 17.340 | |
| SRR5643664 | five period of Gastrodia elata | 19.660 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 11.900 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 12.050 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 13.470 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 14.980 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 13.720 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 12.450 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 13.760 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 11.800 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 12.630 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 13.190 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 12.780 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 12.780 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 24.66 |
| Juven | Juvenile tuber | 19.42 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 16.22 | |
| Mother_Juven | Mother tuber of Juvenile | 26.72 |