Detail information of GWHGAAEX010048/evm.TU.scaffold_268.10


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|297620654|ref|YP_003708791.1|4.00E-31poly(A) polymerase [Waddlia chondrophila WSU 86-1044]
KOGKOG21591.00E-66tRNA nucleotidyltransferase/poly(A) polymerase
nrgi|672134814|ref|XP_008791060.1|8.38E-89PREDICTED: uncharacterized protein LOC103708071 [Phoenix dactylifera]
trEMBLtr|A0A061FYL0|A0A061FYL0_THECC5.00E-81Polynucleotide adenylyltransferase family protein {ECO:0000313|EMBL:EOY22605.1}
TAIRAT3G48830_11.00E-66Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000265207554212468+
Transcript Sequence

Network for GWHGAAEX010048

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01743.19PolyA_pol1102372.10E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006396Biological ProcessRNA processing
GO:0003723Molecular FunctionRNA binding
GO:0016779Molecular Functionnucleotidyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.540
SRR2545915Juvenile tuber5.120
SRP108465SRR5643513five period of Gastrodia elata5.480
SRR5643514five period of Gastrodia elata6.720
SRR5643515five period of Gastrodia elata5.440
SRR5643524five period of Gastrodia elata4.900
SRR5643525five period of Gastrodia elata5.640
SRR5643528five period of Gastrodia elata4.350
SRR5643658five period of Gastrodia elata5.550
SRR5643659five period of Gastrodia elata5.620
SRR5643660five period of Gastrodia elata6.050
SRR5643661five period of Gastrodia elata6.140
SRR5643662five period of Gastrodia elata5.980
SRR5643663five period of Gastrodia elata6.650
SRR5643664five period of Gastrodia elata6.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.080
SRR6049655Rhizomagastrodiae_C368-T10_good_14.260
SRR6049656Rhizomagastrodiae_C368-T07_good_14.450
SRR6049657Rhizomagastrodiae_C368-T07_good_18.170
SRR6049658Rhizomagastrodiae_C368-T04_good_19.330
SRR6049659Rhizomagastrodiae_C368-T04_good_110.630
SRR6049660Rhizomagastrodiae_C368-T01_good_17.250
SRR6049661Rhizomagastrodiae_C368-T04_good_17.100
SRR6049662Rhizomagastrodiae_C368-T01_good_15.920
SRR6049663Rhizomagastrodiae_C368-T01_good_16.000
SRR6049664Rhizomagastrodiae_C368-T10_good_15.320
SRR6049665Rhizomagastrodiae_C368-T10_good_15.320
SRP279888GastroGastrodia elata tuber 10.55
JuvenJuvenile tuber7.74
Mother_GastroMother tuber of Gastrodia elata 5.18
Mother_JuvenMother tuber of Juvenile 8.74