Detail information of GWHGAAEX010061/evm.TU.scaffold_269.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|431798691|ref|YP_007225595.1|2.00E-56dehydrogenase [Echinicola vietnamensis DSM 17526]
KOGKOG07252.00E-120Reductases with broad range of substrate specificities
nrgi|695008748|ref|XP_009390980.1|3.79E-131PREDICTED: tropinone reductase-like 3 isoform X1 [Musa acuminata subsp. malaccensis]
Swissprottr|H9BFQ2|TPRL3_ERYCB6.00E-127Tropinone reductase-like 3
trEMBLtr|A0A068U7D8|A0A068U7D8_COFCA2.00E-131Coffea canephora
TAIRAT4G055302.00E-120indole-3-butyric acid response 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000268102161127283+
Transcript Sequence

Network for GWHGAAEX010061

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13561.5adh_short_C2162451.00E-57
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K11147DHRS4 Metabolic pathways map01100
Retinol metabolismmap00830
Peroxisomemap04146

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms56.680
SRR2545915Juvenile tuber74.780
SRP108465SRR5643513five period of Gastrodia elata103.930
SRR5643514five period of Gastrodia elata126.670
SRR5643515five period of Gastrodia elata100.670
SRR5643524five period of Gastrodia elata116.110
SRR5643525five period of Gastrodia elata79.320
SRR5643528five period of Gastrodia elata86.020
SRR5643658five period of Gastrodia elata67.800
SRR5643659five period of Gastrodia elata71.050
SRR5643660five period of Gastrodia elata66.630
SRR5643661five period of Gastrodia elata64.400
SRR5643662five period of Gastrodia elata59.650
SRR5643663five period of Gastrodia elata65.710
SRR5643664five period of Gastrodia elata60.710
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_188.470
SRR6049655Rhizomagastrodiae_C368-T10_good_1125.020
SRR6049656Rhizomagastrodiae_C368-T07_good_194.590
SRR6049657Rhizomagastrodiae_C368-T07_good_176.680
SRR6049658Rhizomagastrodiae_C368-T04_good_154.480
SRR6049659Rhizomagastrodiae_C368-T04_good_157.590
SRR6049660Rhizomagastrodiae_C368-T01_good_162.020
SRR6049661Rhizomagastrodiae_C368-T04_good_165.750
SRR6049662Rhizomagastrodiae_C368-T01_good_191.830
SRR6049663Rhizomagastrodiae_C368-T01_good_178.920
SRR6049664Rhizomagastrodiae_C368-T10_good_1126.520
SRR6049665Rhizomagastrodiae_C368-T10_good_1126.520
SRP279888GastroGastrodia elata tuber 65.35
JuvenJuvenile tuber79.57
Mother_GastroMother tuber of Gastrodia elata 52.71
Mother_JuvenMother tuber of Juvenile 69.94