Detail information of GWHGAAEX010064/evm.TU.scaffold_269.10


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|592748063|gb|AHL44126.1|1.32E-63EREB1 [Dendrobium catenatum]
Swissprottr|Q9SXS8|ERF3_TOBAC1.00E-34Ethylene-responsive transcription factor 3
trEMBLtr|W8Q904|W8Q904_9ASPA5.00E-64EREB1 {ECO:0000313|EMBL:AHL44126.1}
TAIRAT1G506402.00E-32ethylene responsive element binding factor 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000268350399350932-
Transcript Sequence

Network for GWHGAAEX010064

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP28561.80E-13
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms73.710
SRR2545915Juvenile tuber154.020
SRP108465SRR5643513five period of Gastrodia elata318.750
SRR5643514five period of Gastrodia elata280.420
SRR5643515five period of Gastrodia elata328.650
SRR5643524five period of Gastrodia elata254.880
SRR5643525five period of Gastrodia elata718.880
SRR5643528five period of Gastrodia elata1083.330
SRR5643658five period of Gastrodia elata473.340
SRR5643659five period of Gastrodia elata359.010
SRR5643660five period of Gastrodia elata303.480
SRR5643661five period of Gastrodia elata418.990
SRR5643662five period of Gastrodia elata512.150
SRR5643663five period of Gastrodia elata339.380
SRR5643664five period of Gastrodia elata392.710
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1258.780
SRR6049655Rhizomagastrodiae_C368-T10_good_1483.090
SRR6049656Rhizomagastrodiae_C368-T07_good_1252.970
SRR6049657Rhizomagastrodiae_C368-T07_good_1250.320
SRR6049658Rhizomagastrodiae_C368-T04_good_1205.380
SRR6049659Rhizomagastrodiae_C368-T04_good_1224.720
SRR6049660Rhizomagastrodiae_C368-T01_good_1226.780
SRR6049661Rhizomagastrodiae_C368-T04_good_1200.980
SRR6049662Rhizomagastrodiae_C368-T01_good_1227.110
SRR6049663Rhizomagastrodiae_C368-T01_good_1230.500
SRR6049664Rhizomagastrodiae_C368-T10_good_1284.660
SRR6049665Rhizomagastrodiae_C368-T10_good_1284.660
SRP279888GastroGastrodia elata tuber 209.58
JuvenJuvenile tuber269.77
Mother_GastroMother tuber of Gastrodia elata 933.06
Mother_JuvenMother tuber of Juvenile 885.56