Detail information of GWHGAAEX010075/evm.TU.scaffold_27.22
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|384152901|ref|YP_005535717.1| | 6.00E-19 | serine/threonine protein kinase [Amycolatopsis mediterranei S699] |
| KOG | KOG1187 | 0 | Serine/threonine protein kinase |
| nr | gi|743850720|ref|XP_010939954.1| | 0 | PREDICTED: probable protein kinase At2g41970 [Elaeis guineensis] |
| Swissprot | tr|P93749|Y2197_ARATH | 0 | Probable protein kinase At2g41970 |
| trEMBL | tr|M0SB25|M0SB25_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P02070_001} |
| TAIR | AT2G41970 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000023 | 1295299 | 1301671 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010075
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 74 | 345 | 1.60E-45 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VIII |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0004713 | Molecular Function | protein tyrosine kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 6.770 |
| SRR2545915 | Juvenile tuber | 7.080 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 15.700 |
| SRR5643514 | five period of Gastrodia elata | 9.570 | |
| SRR5643515 | five period of Gastrodia elata | 15.210 | |
| SRR5643524 | five period of Gastrodia elata | 9.370 | |
| SRR5643525 | five period of Gastrodia elata | 0.780 | |
| SRR5643528 | five period of Gastrodia elata | 0.940 | |
| SRR5643658 | five period of Gastrodia elata | 0.850 | |
| SRR5643659 | five period of Gastrodia elata | 1.620 | |
| SRR5643660 | five period of Gastrodia elata | 1.430 | |
| SRR5643661 | five period of Gastrodia elata | 3.080 | |
| SRR5643662 | five period of Gastrodia elata | 1.490 | |
| SRR5643663 | five period of Gastrodia elata | 1.470 | |
| SRR5643664 | five period of Gastrodia elata | 1.120 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 11.960 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 14.060 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 10.290 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 12.290 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 5.370 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 4.180 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 4.680 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 4.970 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 5.740 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 6.440 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 7.630 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 7.630 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.39 |
| Juven | Juvenile tuber | 2.71 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 9.72 | |
| Mother_Juven | Mother tuber of Juvenile | 9.54 |