Detail information of GWHGAAEX010085/evm.TU.scaffold_27.42


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG23381.00E-123Transcriptional effector CCR4-related protein
nrgi|672162642|ref|XP_008801141.1|1.19E-151PREDICTED: carbon catabolite repressor protein 4 homolog 3 isoform X1 [Phoenix dactylifera]
Swissprottr|Q9LS39|CCR4C_ARATH8.00E-127Carbon catabolite repressor protein 4 homolog 3
trEMBLtr|A0A068TQC0|A0A068TQC0_COFCA3.00E-138Coffea canephora
TAIRAT3G185001.00E-123DNAse I-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002324165162448422+
Transcript Sequence

Network for GWHGAAEX010085

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03372.22Exo_endo_phos663805.20E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.140
SRR2545915Juvenile tuber18.840
SRP108465SRR5643513five period of Gastrodia elata20.960
SRR5643514five period of Gastrodia elata24.380
SRR5643515five period of Gastrodia elata18.960
SRR5643524five period of Gastrodia elata22.570
SRR5643525five period of Gastrodia elata16.300
SRR5643528five period of Gastrodia elata15.930
SRR5643658five period of Gastrodia elata16.020
SRR5643659five period of Gastrodia elata18.060
SRR5643660five period of Gastrodia elata18.350
SRR5643661five period of Gastrodia elata17.200
SRR5643662five period of Gastrodia elata13.370
SRR5643663five period of Gastrodia elata15.780
SRR5643664five period of Gastrodia elata14.640
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.460
SRR6049655Rhizomagastrodiae_C368-T10_good_117.270
SRR6049656Rhizomagastrodiae_C368-T07_good_117.480
SRR6049657Rhizomagastrodiae_C368-T07_good_116.370
SRR6049658Rhizomagastrodiae_C368-T04_good_111.410
SRR6049659Rhizomagastrodiae_C368-T04_good_111.320
SRR6049660Rhizomagastrodiae_C368-T01_good_111.580
SRR6049661Rhizomagastrodiae_C368-T04_good_18.810
SRR6049662Rhizomagastrodiae_C368-T01_good_112.750
SRR6049663Rhizomagastrodiae_C368-T01_good_111.540
SRR6049664Rhizomagastrodiae_C368-T10_good_126.380
SRR6049665Rhizomagastrodiae_C368-T10_good_126.380
SRP279888GastroGastrodia elata tuber 12.79
JuvenJuvenile tuber28.63
Mother_GastroMother tuber of Gastrodia elata 18.30
Mother_JuvenMother tuber of Juvenile 25.33