Detail information of GWHGAAEX010096/evm.TU.scaffold_27.55
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|434386176|ref|YP_007096787.1| | 7.00E-18 | glutathione S-transferase [Chamaesiphon minutus PCC 6605] |
| KOG | KOG1422 | 5.00E-95 | Intracellular Cl- channel CLIC, contains GST domain |
| nr | gi|350535987|ref|NP_001234224.1| | 1.77E-110 | dehydroascorbate reductase [Solanum lycopersicum] |
| Swissprot | tr|Q8LE52|DHAR3_ARATH | 5.00E-107 | Glutathione S-transferase DHAR3, chloroplastic (Precursor) |
| trEMBL | tr|Q4VDN7|Q4VDN7_SOLLC | 7.00E-111 | Dehydroascorbate reductase {ECO:0000313|EMBL:AAY47049.1} |
| TAIR | AT5G16710_1 | 5.00E-95 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000023 | 2779860 | 2832518 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX010096
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF13417.5 | GST_N_3 | 71 | 140 | 6.50E-17 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K21888 | DHAR | Metabolic pathways | map01100 |
| Ascorbate and aldarate metabolism | map00053 | ||
| Glutathione metabolism | map00480 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0005515 | Molecular Function | protein binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 12.740 |
| SRR2545915 | Juvenile tuber | 21.270 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 11.370 |
| SRR5643514 | five period of Gastrodia elata | 13.620 | |
| SRR5643515 | five period of Gastrodia elata | 13.030 | |
| SRR5643524 | five period of Gastrodia elata | 14.170 | |
| SRR5643525 | five period of Gastrodia elata | 8.840 | |
| SRR5643528 | five period of Gastrodia elata | 8.100 | |
| SRR5643658 | five period of Gastrodia elata | 7.630 | |
| SRR5643659 | five period of Gastrodia elata | 13.610 | |
| SRR5643660 | five period of Gastrodia elata | 12.900 | |
| SRR5643661 | five period of Gastrodia elata | 11.290 | |
| SRR5643662 | five period of Gastrodia elata | 14.330 | |
| SRR5643663 | five period of Gastrodia elata | 14.960 | |
| SRR5643664 | five period of Gastrodia elata | 12.390 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 12.660 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 17.700 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 12.830 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 9.310 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 8.060 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 5.460 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 9.850 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 7.240 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 14.440 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 10.880 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 15.480 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 15.480 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 13.00 |
| Juven | Juvenile tuber | 11.05 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 7.73 | |
| Mother_Juven | Mother tuber of Juvenile | 8.48 |