Detail information of GWHGAAEX010108/evm.TU.scaffold_27.76


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|226496069|ref|NP_001143259.1|3.04E-17uncharacterized protein LOC100275788 [Zea mays]
Swissprottr|Q9SKX1|IBH1_ARATH3.00E-14Transcription factor IBH1
trEMBLtr|B6SZB4|B6SZB4_MAIZE1.00E-17Putative uncharacterized protein {ECO:0000313|EMBL:ACG30197.1}
TAIRAT2G430609.00E-14ILI1 binding bHLH 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002342748194276241+
Transcript Sequence

Network for GWHGAAEX010108

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.820
SRR2545915Juvenile tuber1.690
SRP108465SRR5643513five period of Gastrodia elata17.900
SRR5643514five period of Gastrodia elata16.000
SRR5643515five period of Gastrodia elata17.580
SRR5643524five period of Gastrodia elata14.510
SRR5643525five period of Gastrodia elata93.800
SRR5643528five period of Gastrodia elata111.050
SRR5643658five period of Gastrodia elata114.210
SRR5643659five period of Gastrodia elata21.080
SRR5643660five period of Gastrodia elata21.240
SRR5643661five period of Gastrodia elata22.560
SRR5643662five period of Gastrodia elata48.290
SRR5643663five period of Gastrodia elata37.300
SRR5643664five period of Gastrodia elata71.250
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_131.980
SRR6049655Rhizomagastrodiae_C368-T10_good_1118.680
SRR6049656Rhizomagastrodiae_C368-T07_good_128.010
SRR6049657Rhizomagastrodiae_C368-T07_good_136.550
SRR6049658Rhizomagastrodiae_C368-T04_good_134.920
SRR6049659Rhizomagastrodiae_C368-T04_good_135.930
SRR6049660Rhizomagastrodiae_C368-T01_good_137.800
SRR6049661Rhizomagastrodiae_C368-T04_good_128.830
SRR6049662Rhizomagastrodiae_C368-T01_good_127.920
SRR6049663Rhizomagastrodiae_C368-T01_good_130.830
SRR6049664Rhizomagastrodiae_C368-T10_good_125.180
SRR6049665Rhizomagastrodiae_C368-T10_good_125.180
SRP279888GastroGastrodia elata tuber 61.50
JuvenJuvenile tuber68.93
Mother_GastroMother tuber of Gastrodia elata 170.40
Mother_JuvenMother tuber of Juvenile 57.35