Detail information of GWHGAAEX010112/evm.TU.scaffold_27.80


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672161850|ref|XP_008800750.1|0PREDICTED: NAC domain-containing protein 8 isoform X2 [Phoenix dactylifera]
Swissprottr|Q6NQK2|NAC8_ARATH1.00E-149NAC domain-containing protein 8
trEMBLtr|M0SCK0|M0SCK0_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P07330_001}
TAIRAT1G255804.00E-147NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002346597064693855-
Transcript Sequence

Network for GWHGAAEX010112

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.14NAM591971.80E-22
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.880
SRR2545915Juvenile tuber21.580
SRP108465SRR5643513five period of Gastrodia elata19.140
SRR5643514five period of Gastrodia elata19.930
SRR5643515five period of Gastrodia elata16.600
SRR5643524five period of Gastrodia elata21.880
SRR5643525five period of Gastrodia elata15.580
SRR5643528five period of Gastrodia elata14.260
SRR5643658five period of Gastrodia elata14.840
SRR5643659five period of Gastrodia elata14.000
SRR5643660five period of Gastrodia elata17.210
SRR5643661five period of Gastrodia elata15.000
SRR5643662five period of Gastrodia elata17.470
SRR5643663five period of Gastrodia elata16.380
SRR5643664five period of Gastrodia elata16.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.460
SRR6049655Rhizomagastrodiae_C368-T10_good_120.840
SRR6049656Rhizomagastrodiae_C368-T07_good_117.200
SRR6049657Rhizomagastrodiae_C368-T07_good_116.920
SRR6049658Rhizomagastrodiae_C368-T04_good_116.260
SRR6049659Rhizomagastrodiae_C368-T04_good_117.840
SRR6049660Rhizomagastrodiae_C368-T01_good_114.730
SRR6049661Rhizomagastrodiae_C368-T04_good_114.490
SRR6049662Rhizomagastrodiae_C368-T01_good_119.420
SRR6049663Rhizomagastrodiae_C368-T01_good_120.200
SRR6049664Rhizomagastrodiae_C368-T10_good_122.260
SRR6049665Rhizomagastrodiae_C368-T10_good_122.260
SRP279888GastroGastrodia elata tuber 23.00
JuvenJuvenile tuber19.59
Mother_GastroMother tuber of Gastrodia elata 30.57
Mother_JuvenMother tuber of Juvenile 25.05