Detail information of GWHGAAEX010116/evm.TU.scaffold_27.84


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|333910254|ref|YP_004483987.1|2.00E-141ATPase AAA [Methanotorris igneus Kol 5]
KOGKOG07300AAA+-type ATPase
nrgi|695033201|ref|XP_009404121.1|0PREDICTED: cell division control protein 48 homolog B [Musa acuminata subsp. malaccensis]
Swissprottr|Q9ZPR1|CD48B_ARATH0Cell division control protein 48 homolog B
trEMBLtr|M0T607|M0T607_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P11080_001}
TAIRAT2G036700cell division cycle 48B

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002347964864825667-
Transcript Sequence

Network for GWHGAAEX010116

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00004.28AAA1632881.40E-27
PF00004.28AAA4185528.80E-39
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.040
SRR2545915Juvenile tuber24.260
SRP108465SRR5643513five period of Gastrodia elata25.230
SRR5643514five period of Gastrodia elata25.030
SRR5643515five period of Gastrodia elata23.450
SRR5643524five period of Gastrodia elata22.420
SRR5643525five period of Gastrodia elata37.440
SRR5643528five period of Gastrodia elata24.660
SRR5643658five period of Gastrodia elata29.240
SRR5643659five period of Gastrodia elata38.970
SRR5643660five period of Gastrodia elata40.700
SRR5643661five period of Gastrodia elata38.790
SRR5643662five period of Gastrodia elata53.410
SRR5643663five period of Gastrodia elata49.520
SRR5643664five period of Gastrodia elata57.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_138.810
SRR6049655Rhizomagastrodiae_C368-T10_good_139.860
SRR6049656Rhizomagastrodiae_C368-T07_good_133.900
SRR6049657Rhizomagastrodiae_C368-T07_good_140.970
SRR6049658Rhizomagastrodiae_C368-T04_good_138.780
SRR6049659Rhizomagastrodiae_C368-T04_good_139.400
SRR6049660Rhizomagastrodiae_C368-T01_good_139.810
SRR6049661Rhizomagastrodiae_C368-T04_good_133.580
SRR6049662Rhizomagastrodiae_C368-T01_good_127.870
SRR6049663Rhizomagastrodiae_C368-T01_good_130.170
SRR6049664Rhizomagastrodiae_C368-T10_good_128.030
SRR6049665Rhizomagastrodiae_C368-T10_good_128.030
SRP279888GastroGastrodia elata tuber 51.22
JuvenJuvenile tuber51.68
Mother_GastroMother tuber of Gastrodia elata 42.73
Mother_JuvenMother tuber of Juvenile 44.36