Detail information of GWHGAAEX010117/evm.TU.scaffold_27.85


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|719972321|ref|XP_010277180.1|4.53E-32PREDICTED: late embryogenesis abundant protein D-34-like [Nelumbo nucifera]
Swissprottr|P09444|LEA34_GOSHI4.00E-26Late embryogenesis abundant protein D-34
trEMBLtr|A5AV43|A5AV43_VITVI2.00E-29Putative uncharacterized protein {ECO:0000313|EMBL:CAN67177.1}
TAIRAT3G224902.00E-26Seed maturation protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002348259004826364-
Transcript Sequence

Network for GWHGAAEX010117

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module13

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04927.11SMP12671.90E-13
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.960
SRR2545915Juvenile tuber3.880
SRP108465SRR5643513five period of Gastrodia elata17.330
SRR5643514five period of Gastrodia elata9.030
SRR5643515five period of Gastrodia elata19.570
SRR5643524five period of Gastrodia elata4.650
SRR5643525five period of Gastrodia elata59.030
SRR5643528five period of Gastrodia elata25.970
SRR5643658five period of Gastrodia elata47.270
SRR5643659five period of Gastrodia elata12.040
SRR5643660five period of Gastrodia elata3.850
SRR5643661five period of Gastrodia elata6.980
SRR5643662five period of Gastrodia elata22.340
SRR5643663five period of Gastrodia elata15.670
SRR5643664five period of Gastrodia elata126.540
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.010
SRR6049655Rhizomagastrodiae_C368-T10_good_12.870
SRR6049656Rhizomagastrodiae_C368-T07_good_113.420
SRR6049657Rhizomagastrodiae_C368-T07_good_112.020
SRR6049658Rhizomagastrodiae_C368-T04_good_111.230
SRR6049659Rhizomagastrodiae_C368-T04_good_14.050
SRR6049660Rhizomagastrodiae_C368-T01_good_114.280
SRR6049661Rhizomagastrodiae_C368-T04_good_117.190
SRR6049662Rhizomagastrodiae_C368-T01_good_15.890
SRR6049663Rhizomagastrodiae_C368-T01_good_19.020
SRR6049664Rhizomagastrodiae_C368-T10_good_110.400
SRR6049665Rhizomagastrodiae_C368-T10_good_110.400
SRP279888GastroGastrodia elata tuber 9.00
JuvenJuvenile tuber8.08
Mother_GastroMother tuber of Gastrodia elata 9.73
Mother_JuvenMother tuber of Juvenile 16.17