Detail information of GWHGAAEX010123/evm.TU.scaffold_27.94


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG08594.00E-135Synaptobrevin/VAMP-like protein
nrgi|703149870|ref|XP_010109710.1|7.57E-148Putative vesicle-associated membrane protein 726 [Morus notabilis]
Swissprottr|Q9MAS5|VA726_ARATH1.00E-135Putative vesicle-associated membrane protein 726
trEMBLtr|W9S386|W9S386_9ROSA3.00E-148Putative vesicle-associated membrane protein 726 {ECO:0000313|EMBL:EXC24180.1}
TAIRAT1G047604.00E-135vesicle-associated membrane protein 726

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002351260735139142-
Transcript Sequence

Network for GWHGAAEX010123

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13774.5Longin321111.60E-23
PF00957.20Synaptobrevin1292151.30E-32
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0016192Biological Processvesicle-mediated transport
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms33.590
SRR2545915Juvenile tuber31.640
SRP108465SRR5643513five period of Gastrodia elata50.390
SRR5643514five period of Gastrodia elata42.190
SRR5643515five period of Gastrodia elata60.830
SRR5643524five period of Gastrodia elata46.610
SRR5643525five period of Gastrodia elata85.360
SRR5643528five period of Gastrodia elata120.900
SRR5643658five period of Gastrodia elata67.430
SRR5643659five period of Gastrodia elata44.450
SRR5643660five period of Gastrodia elata46.800
SRR5643661five period of Gastrodia elata50.850
SRR5643662five period of Gastrodia elata59.980
SRR5643663five period of Gastrodia elata51.490
SRR5643664five period of Gastrodia elata42.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_138.680
SRR6049655Rhizomagastrodiae_C368-T10_good_136.200
SRR6049656Rhizomagastrodiae_C368-T07_good_140.910
SRR6049657Rhizomagastrodiae_C368-T07_good_133.840
SRR6049658Rhizomagastrodiae_C368-T04_good_139.660
SRR6049659Rhizomagastrodiae_C368-T04_good_138.130
SRR6049660Rhizomagastrodiae_C368-T01_good_134.610
SRR6049661Rhizomagastrodiae_C368-T04_good_136.080
SRR6049662Rhizomagastrodiae_C368-T01_good_155.220
SRR6049663Rhizomagastrodiae_C368-T01_good_146.950
SRR6049664Rhizomagastrodiae_C368-T10_good_154.260
SRR6049665Rhizomagastrodiae_C368-T10_good_154.260
SRP279888GastroGastrodia elata tuber 53.95
JuvenJuvenile tuber35.41
Mother_GastroMother tuber of Gastrodia elata 123.08
Mother_JuvenMother tuber of Juvenile 108.19