Detail information of GWHGAAEX010124/evm.TU.scaffold_27.96


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428202887|ref|YP_007081476.1|2.00E-14thiol-disulfide isomerase-like thioredoxin [Pleurocapsa sp. PCC 7327]
nrgi|743774654|ref|XP_010917687.1|4.36E-90PREDICTED: uncharacterized protein LOC105042252 [Elaeis guineensis]
Swissprottr|Q7Y0D4|TR164_ORYSJ9.00E-11Thioredoxin-like protein HCF164, chloroplastic (Precursor)
trEMBLtr|M0SX72|M0SX72_MUSAM7.00E-85Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P09930_001}
TAIRAT5G064307.00E-73Thioredoxin superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002352466885277335+
Transcript Sequence

Network for GWHGAAEX010124

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00085.19Thioredoxin951721.90E-05
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0045454Biological Processcell redox homeostasis

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.070
SRR2545915Juvenile tuber7.880
SRP108465SRR5643513five period of Gastrodia elata12.080
SRR5643514five period of Gastrodia elata10.220
SRR5643515five period of Gastrodia elata7.710
SRR5643524five period of Gastrodia elata10.120
SRR5643525five period of Gastrodia elata10.830
SRR5643528five period of Gastrodia elata5.960
SRR5643658five period of Gastrodia elata9.360
SRR5643659five period of Gastrodia elata12.630
SRR5643660five period of Gastrodia elata14.990
SRR5643661five period of Gastrodia elata17.460
SRR5643662five period of Gastrodia elata16.600
SRR5643663five period of Gastrodia elata17.790
SRR5643664five period of Gastrodia elata16.830
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.590
SRR6049655Rhizomagastrodiae_C368-T10_good_111.800
SRR6049656Rhizomagastrodiae_C368-T07_good_112.520
SRR6049657Rhizomagastrodiae_C368-T07_good_115.280
SRR6049658Rhizomagastrodiae_C368-T04_good_113.810
SRR6049659Rhizomagastrodiae_C368-T04_good_110.010
SRR6049660Rhizomagastrodiae_C368-T01_good_111.290
SRR6049661Rhizomagastrodiae_C368-T04_good_115.720
SRR6049662Rhizomagastrodiae_C368-T01_good_112.320
SRR6049663Rhizomagastrodiae_C368-T01_good_19.970
SRR6049664Rhizomagastrodiae_C368-T10_good_111.440
SRR6049665Rhizomagastrodiae_C368-T10_good_111.440
SRP279888GastroGastrodia elata tuber 16.28
JuvenJuvenile tuber20.11
Mother_GastroMother tuber of Gastrodia elata 7.84
Mother_JuvenMother tuber of Juvenile 11.72