Detail information of GWHGAAEX010126/evm.TU.scaffold_27.101


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17453.00E-22Histones H3 and H4
nrgi|700211373|gb|KGN66469.1|5.94E-22hypothetical protein Csa_1G612925 [Cucumis sativus]
Swissprottr|Q402E1|H32_LILLO9.00E-23Histone H3.2
trEMBLtr|A0A0A0LZM9|A0A0A0LZM9_CUCSA2.00E-22Uncharacterized protein {ECO:0000313|EMBL:KGN66469.1}
TAIRAT5G653603.00E-22Histone superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002354803595481962-
Transcript Sequence

Network for GWHGAAEX010126

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00125.23Histone821471.50E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
GO:0000786Cellular Componentnucleosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.450
SRR2545915Juvenile tuber5.690
SRP108465SRR5643513five period of Gastrodia elata8.540
SRR5643514five period of Gastrodia elata10.150
SRR5643515five period of Gastrodia elata7.040
SRR5643524five period of Gastrodia elata11.170
SRR5643525five period of Gastrodia elata13.470
SRR5643528five period of Gastrodia elata4.850
SRR5643658five period of Gastrodia elata13.700
SRR5643659five period of Gastrodia elata10.620
SRR5643660five period of Gastrodia elata11.530
SRR5643661five period of Gastrodia elata12.160
SRR5643662five period of Gastrodia elata10.380
SRR5643663five period of Gastrodia elata11.140
SRR5643664five period of Gastrodia elata14.110
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.050
SRR6049655Rhizomagastrodiae_C368-T10_good_113.270
SRR6049656Rhizomagastrodiae_C368-T07_good_13.250
SRR6049657Rhizomagastrodiae_C368-T07_good_13.960
SRR6049658Rhizomagastrodiae_C368-T04_good_10.960
SRR6049659Rhizomagastrodiae_C368-T04_good_10.750
SRR6049660Rhizomagastrodiae_C368-T01_good_10.850
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_11.580
SRR6049663Rhizomagastrodiae_C368-T01_good_10.520
SRR6049664Rhizomagastrodiae_C368-T10_good_15.630
SRR6049665Rhizomagastrodiae_C368-T10_good_15.630
SRP279888GastroGastrodia elata tuber 7.09
JuvenJuvenile tuber13.41
Mother_GastroMother tuber of Gastrodia elata 10.67
Mother_JuvenMother tuber of Juvenile 10.94