Detail information of GWHGAAEX010133/evm.TU.scaffold_27.108


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|320161445|ref|YP_004174669.1|7.00E-53peptidyl-tRNA hydrolase [Anaerolinea thermophila UNI-1]
KOGKOG22556.00E-92Peptidyl-tRNA hydrolase
nrgi|743815591|ref|XP_010930381.1|6.88E-116PREDICTED: peptidyl-tRNA hydrolase, mitochondrial [Elaeis guineensis]
Swissprottr|Q6NLS8|PTHM_ARATH8.00E-97Peptidyl-tRNA hydrolase, mitochondrial (Precursor)
trEMBLtr|M0SIX3|M0SIX3_MUSAM2.00E-115Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P29570_001}
TAIRAT5G198306.00E-92Peptidyl-tRNA hydrolase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002358844725949324+
Transcript Sequence

Network for GWHGAAEX010133

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01195.18Pept_tRNA_hydro272041.20E-49
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0004045Molecular Functionaminoacyl-tRNA hydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.230
SRR2545915Juvenile tuber6.760
SRP108465SRR5643513five period of Gastrodia elata10.380
SRR5643514five period of Gastrodia elata13.580
SRR5643515five period of Gastrodia elata13.790
SRR5643524five period of Gastrodia elata13.390
SRR5643525five period of Gastrodia elata8.960
SRR5643528five period of Gastrodia elata6.660
SRR5643658five period of Gastrodia elata5.960
SRR5643659five period of Gastrodia elata12.260
SRR5643660five period of Gastrodia elata12.100
SRR5643661five period of Gastrodia elata9.230
SRR5643662five period of Gastrodia elata5.900
SRR5643663five period of Gastrodia elata7.580
SRR5643664five period of Gastrodia elata7.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.780
SRR6049655Rhizomagastrodiae_C368-T10_good_18.630
SRR6049656Rhizomagastrodiae_C368-T07_good_111.940
SRR6049657Rhizomagastrodiae_C368-T07_good_16.120
SRR6049658Rhizomagastrodiae_C368-T04_good_17.450
SRR6049659Rhizomagastrodiae_C368-T04_good_15.030
SRR6049660Rhizomagastrodiae_C368-T01_good_16.290
SRR6049661Rhizomagastrodiae_C368-T04_good_17.720
SRR6049662Rhizomagastrodiae_C368-T01_good_16.580
SRR6049663Rhizomagastrodiae_C368-T01_good_18.560
SRR6049664Rhizomagastrodiae_C368-T10_good_19.720
SRR6049665Rhizomagastrodiae_C368-T10_good_19.720
SRP279888GastroGastrodia elata tuber 10.65
JuvenJuvenile tuber9.67
Mother_GastroMother tuber of Gastrodia elata 4.51
Mother_JuvenMother tuber of Juvenile 3.84